Gene Pecwa_1680 details

Gene Information

• Locus tag: Pecwa_1680
• ID: 8530077
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1831140
• End bp: 1833242
• Gene Length: 2103 bp
• Protein Length: 700 aa
• Translation table: 11
• GC content: 40%
• Product: hypothetical protein
• Protein accession: YP_003259075
• Protein GI: 261820969

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGTGGCGA CAGGTGACTT GCGCCTATAT TCGCAATTGA TTCGCGGTAA GCAATACGAA 
AATTACAGCA AAACTTTGCT CGATCAGGAA AAAGAGAGCG CCCGCTTAGC AGAGCGGGGC 
TATATGGTTG AACACCTTGA ACAGCAATAT TTATTAAAAC TTTTTCCGGT ACAAAAGCGT 
ATTCAGCTGA AAACCATGTT GCAACTGGTC GGCGAAAAGG GAAAAGTCGG TAAAGAGAAG 
ATCAAGGTGA AAACCGAGTT TGACATGCAG GATATCTATG CCATAGATGT CCGGCAAGCG 
GTTGGCGATG CTGTTAGGGA AGGCCTTAAT TTGAGAGAGG GCTCTGATGC AGACATGTAT 
GTGAATGAAC TGCTGAAGCA GCCAGTGCGG TTGTTGATGC AGGTGCTTCA GGATTTCTAT 
ACCAAAAAAT ATCATGCTAC ATCGGTAAAA CATGATGGTA AACAAGGCAG CAATGAAAGG 
CCTGATGAGT TATCAGTTCC GAATTTACTT AGAAATGCCT TATATGGTTC GATGCTAAGC 
AGCATTTATC GCGCTGGGTT AAATTATGAA CAACATCGGT TTGGTATGGA TTCGCTCTGT 
AAGGATATAT TTACCTATGT AAAGCAGGAT CGTGATTTTA ATACCGGATT TTATTTGCGA 
CCTCAGTCTG AAAGTGAAGC ATTAAGAAAT TGCTCTATTT ATTTAGCGTC TCAGGTAAGT 
GAAAACTGTC AAGGCAGTCT GTCAAAGTTT CTACAGATGC TTTTGGTTGG TTGTGGTTCC 
GTCAGCATAT TTAACCAATT TGTGACCGAG TTAGCACAGG CTGAAAATGA TAGAGAAAAA 
TTCGAACAGC TTGTTAGTGA ATATGTAGCT TATATGTCTG TTGGCAGAAA TGAAAGCGCC 
TCACATTGGG CTAATCGATG TTGTGCGGTG GTTGCAAACA ACCCTAATGA TGAAAAGGTT 
GGCGTTTTTC TTGGCATGGT GCAGTTAAAT CGTAAATCAC GCCAAAACAT ACCCGAGGGT 
TACAAAAAAT TTAACATTGA TACTGAGAAT GGCTTGGCAA AAGCCGCAAT GGCGGCTTCC 
TTGAGTACGG TGGCTTCAAA TAACCTTATG GATTTCAGTA GTGTTTTTAA TCTGATTGGT 
GCTATTGCAG ATATCTCTAC ATGCCGTCGT GAAAAGCCTG CCATTACTAA TGCTTTTAAT 
AAAGTTATAG CTCAGACAAC ATGTATCGTT CCCCCATGGA GCGAGGCTGC TGCTCGTGCA 
GAAATGAAAG GCTCAAGTAT AAATGCGGAT AGCGATGCTG CTATTTTGGA TGTTGACCTT 
GATCCCAAGG ATGATGGCGT AACTGATGAC AGTCAGCAGG ATGACACAAC GGAATTTTCT 
GATGCCATTA CTAAAGTTGA GCAATGGCTT GAAAAAGTAA ACGAAATTGA GATTGAAATT 
CGTCCGTCGG CACTTTTGAT TGGTAAAGTA TGGACTCGGT TCTATTTCAA CCTTAATAAT 
GTGACTGATC AGCATAAAAC CAGGCTCTAT AATGATGCAG AGCATGGACT AATGGCCAGT 
CAATCAAATG CTGCGAAAAT TATGCGTTTT AATGTTTTGG CTTTTCTTCA TGCGGTATTG 
GTTGAAGAGA GCTTATATCA TTCTGTTAGT GATAGGGAAT ATATCGGTGA AGGGTTAAGA 
CTAAATCCAG TTACTTCGGT TGATGAGTTT GAGAAAAAGA TAAATGTAAT GAATGAAGGA 
TTGAAAACGG ATAAGAAAAC ATGGAAAGAT ACCCATCCAT TGTTTTTCTT ATTAATTAGC 
TGTCCAATTC TACATCCGTT CATTTTTCCT GTAGGAGGGA TTAATTGTTC AGCAAAAGCA 
CTGAGCAAGG AAGCAAGTTT CCTTAAACTG ATTGGTGAAA TTGTTGGCGG CCAATTACTT 
TCTGAAGAAG AATGGGGGTG TTTATCTGAA AATGATAATG GCAAAAGAAA CATTAAACAA 
CAGACGTTTC AAAACACTAT AACATCGCTG AATTCCTCCA CAATCGTCGG AGCATCATAC 
AATAAGGCTA CGCCAGCTAG GAAAAGCAGG TTGCTTTCAT TAAGTGACGA CGTAGAAAAA 
TAA 

 

Protein sequence

MVATGDLRLY SQLIRGKQYE NYSKTLLDQE KESARLAERG YMVEHLEQQY LLKLFPVQKR 
IQLKTMLQLV GEKGKVGKEK IKVKTEFDMQ DIYAIDVRQA VGDAVREGLN LREGSDADMY 
VNELLKQPVR LLMQVLQDFY TKKYHATSVK HDGKQGSNER PDELSVPNLL RNALYGSMLS 
SIYRAGLNYE QHRFGMDSLC KDIFTYVKQD RDFNTGFYLR PQSESEALRN CSIYLASQVS 
ENCQGSLSKF LQMLLVGCGS VSIFNQFVTE LAQAENDREK FEQLVSEYVA YMSVGRNESA 
SHWANRCCAV VANNPNDEKV GVFLGMVQLN RKSRQNIPEG YKKFNIDTEN GLAKAAMAAS 
LSTVASNNLM DFSSVFNLIG AIADISTCRR EKPAITNAFN KVIAQTTCIV PPWSEAAARA 
EMKGSSINAD SDAAILDVDL DPKDDGVTDD SQQDDTTEFS DAITKVEQWL EKVNEIEIEI 
RPSALLIGKV WTRFYFNLNN VTDQHKTRLY NDAEHGLMAS QSNAAKIMRF NVLAFLHAVL 
VEESLYHSVS DREYIGEGLR LNPVTSVDEF EKKINVMNEG LKTDKKTWKD THPLFFLLIS 
CPILHPFIFP VGGINCSAKA LSKEASFLKL IGEIVGGQLL SEEEWGCLSE NDNGKRNIKQ 
QTFQNTITSL NSSTIVGASY NKATPARKSR LLSLSDDVEK