Gene Pecwa_1641 details

Gene Information

• Locus tag: Pecwa_1641
• ID: 8530036
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1778565
• End bp: 1779296
• Gene Length: 732 bp
• Protein Length: 243 aa
• Translation table: 11
• GC content: 58%
• Product: putative secreted protein
• Protein accession: YP_003259038
• Protein GI: 261820932

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGTC TGATGACGAT CCTCCTCACT GCCACACTGG CCACTCTGAC ACTGGCCACT 
CTGACAATGT CCGCGATGGC ACAGCCCTCC ACCACGATGC AATCCCGTAT CGTACCGACC 
CAGGTCGAAC AGCACCGGGA CGAACGTCTG GCGCAGGACT GGGGCTTGAA CACTGACGAA 
TGGTTGCGCT ATCGCGAACT CATGGAGGGG CCCCTCGGCA CCTACTCACC CAACCTCGAC 
CCACTATCAG CATTGGGCAT CGAGGCCCGC AGTGACGACG AGCGACAACG CTATGCCGAA 
CTACAAGTAC AGACAGAAGC ACGTCGTGTT GAAAAACTGC TGGCTTATCA GCGAGCGTAC 
GACGAAGCCT GGCAAAGACA GAATCCCGAC ATGCTGCGGG TAAATTTGCC TGATGCCGGA 
CTCAACAAAA ACACGGTAAC CGGAAACGGA CGCACGGCGG TGTTCGTCAA GGAGAATTGC 
CAACCATGCG CCCAACTTGT GCAGCGCTTA CAGACCTCCG GCACGCCCTT CGACCTGTAT 
ATGGTCGGTT CACGCCAGGA CGATGCACGC ATCCGGGATT GGGCCAGACG CGCACAGATT 
GACCCAGAGC AGGTACGCAA TAGCACCATC ACACTGAACC ACGACGCAGG TCGCTGGTTG 
TCTCTTGGGC TGTCCGGAGA CCTGCCCGCC AGTGTCAGAC AGGTAAATGG TCAATGGCAG 
CGTCAGCCCT GA 

 

Protein sequence

MKRLMTILLT ATLATLTLAT LTMSAMAQPS TTMQSRIVPT QVEQHRDERL AQDWGLNTDE 
WLRYRELMEG PLGTYSPNLD PLSALGIEAR SDDERQRYAE LQVQTEARRV EKLLAYQRAY 
DEAWQRQNPD MLRVNLPDAG LNKNTVTGNG RTAVFVKENC QPCAQLVQRL QTSGTPFDLY 
MVGSRQDDAR IRDWARRAQI DPEQVRNSTI TLNHDAGRWL SLGLSGDLPA SVRQVNGQWQ 
RQP