Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1609 |
Symbol | |
ID | 8530004 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1744928 |
End bp | 1749271 |
Gene Length | 4344 bp |
Protein Length | 1447 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | |
Product | YD repeat protein |
Protein accession | YP_003259006 |
Protein GI | 261820900 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGTGAGG AAATTCTCTC CCGCATTGCG CGGGTAGGGG CGATGCACGC GGGTAACCGT CCTAAACCGC CGCCGGATTT ACCTGAACCG GGTCAGGGTA AACCGCCTAC CTCGCCGGGC AAGGCCATCA AGCACAGCAG CTTCTGGGGC GCACTGGCCG GCGCGGCTGT CGGGGCGTTA ATTGCTGCTG CCGCGTTTAC CGTGGCGGCA GCAGCCGTCG CGGGTGCCGT GGCCCTGACC GGCATCACCG GCGGGGCCGG TCTGGCTCTG GTGGTGGGGG TCGTCAAGCT TGCAGTCGGA TTTGGTGCCG TGTTTGCGCT GGGTGACCTG ATAGGCGGCG TCACTAACCG GGTCTCGGCC ATGGTGGACA GCGCCTCGCC TTCATCGGGG GCGGTCAAGG ATGGCTCAAA GACCGTCTTT GTCGAAGGCA ATCCGGTCTC GCGCGCTGAA ATCGATGCGG TGCTGTGCGA CAAACACAGC GGCCCGCAAC TGATTGCCCA GGGCAGTGCC ACGGTATTTG TCGAGGGCTA CTATGCGGCG CGGGTGGGGG ACAAAACCGT CTGTGGAGCC ACGATCAAGG AAGGCGCTTC GACGGTGTTC TTTGGTTCAG GCCAGGAATC GCCTCTCTCG GTAGCGGACG AGTTCAGCGG CTGGGAAAAA GCGCTGATAC TCGCGGTGGA ATTCCTGATG CCCCCTAGTC GCGGTCTGTT CCGGGGACTG GGCAAGCTGT TTACCAAAGG GCCGATGGCG GTGCTGCGGG GCATGAAAGC GGGAGCAGCA CATGCCCTGG AAGGGCTCCG TAGCGCCGTG CAGTGCGCGA AAAACGGCTT TAAAGAAAGC AAAGGACTGG CGCGTGTCAC CGAATCCATT CGCGGCTTCC TGAAAGACCC CGTCTACATC GCTAGTGGTG AGGTCATTGA AAAACGCCTC GATCTGGAGC TGGGCCAGAC CGTTCCGCTG CTATTCGAGC GCACCTACCG CTCCGGTAGC CCTCACTCCG GCCTGCTGGG GCATGGCTGG CACGATAGCT GGAGTGAGGT GGCCACAGTG GGTCGCACCG AGCAGGGTGA CATCCAGGTG ACGCTCACCC TGGCACAGGG CTACGACATC GACTTCACCT TCGTGGTCGG TGCGACCGTG GTGTACTGCG CCGAATACCC AGAATTCAAA CTGGTGAAAC GCCATAACGG CTTTCACCTG TGGCACCGCG ACAGCCAGAC CTGGCGGGCG TTTACCGCCA AGCAGGGAGA CCAGCTACTG CTGTCGGCTA TCACCGACAA CCACCGCAAC CGCATCGACT TTCTGCGCGA TCCGAAAGGC TACCTGCGCA AGATCAGACA CAGTGACGGC ATAGAACTGC TGCTGGTGTG GCAGGGCGAG TTCCTGCGCC AGGTACAGCG CATTGACGGT GGCCAGAAAA CGGTGCTGGC CGAATACCGG CAGGATGAAC AGGGACGGCT TGTCGAGGCC GACGCCGCCC ATGCCTACCA CCTGTTCTAC GACTACGACA GCCATCACCG TCTGATCCGC TGGCACGACA ACGACCAGAC CTGGGCACGG TATGAATACG ACCCTCAGGG GCGCTGCGTT TATACCACCT GTGCCGATGG CTACCTGACG GCTAATTTTG AGTACCTGGC CGACCGCGTG GTGATGATTG ACGGGCTGGG GCAACGCCAT GAATACGGCT TCAACGACCT GTACCTGATG GCCTGGGAGA AATCCCCGCT TGGCCATATC ACCCATTACG AATACGACGA CGTAGGCAAC CTGCTGCGGG AAATCTCTCC GGCAGGGCGG GTCGTGGAAT TTGCCTATCT GGACAACAGC GGACTGGTCA GCACCTTTAC CGACGGCAGC GGCCATCAGT GGCACTACGA CTATGACCAC TACGAGCGGC TGATCGGCAT CACCGACCCA TTAGGTCGCA GTTGGGCATG GCAGTACGAC AGCAAGGGCA ATCCGCTGAG CCTGACCGGG CCGGACGCCA GCGAAGTCCG GTTTGCGTGG AATCGCTACG GCCTGCTGAC CGAGGTGAGT GATGAACAAG GCCGGACGCA GGCCAGCCTG TTTTATGACC ACCGGCACCG CCTGATGAGT GCCACTGATG CGGAATCCCG CACCCGGCAA CTGCGCTATG ACCAGCAAGA CCGCCTTACA AGCTGGACAC GCCCGGATGG TGCCACCTAT CGCCTAGGGT ATCGCCGTGC CAGTTGGAAA CTGCCGGAAC AACTGCTGCG CCCGGACGAT AAGCAAGAGC AACGCCAGTA CGACAAACAC AACAACCTGC TGAACTACAC CGACGGTAAC GGCGCGGTAT GGGCACAAAC CTACGGCCCG TTCGACCTGC TGACTTCACG CACCGACGCT GAAGGCCGTA CCTGGCAGTA CGAATATGAT AAAGAAAGCC AGCAACTGGT GTGCGTCACC GCACCGGATG GCAACCGCTG GCAATGGTGG TTGGATGCCG ATGCACGGGT TATCCGTGAG CGGGACATGG CGGGGACGGA AACCCATTAC GGCTACGATG AGGACGGACA TTGCATCGCG GTTCGTAACG GCGAAGGAGA AACCCGCCAC TTTCTGTACG ACGGGCGCGG CCTGCTTATC AAAGAAACCG CGCCGGACGA CACCCTGCAC TACCGCTACG ATGCGGCAGG CAGGCTGATC GAAGTGACAT CCTCCACCAG TCATATCCAG CTTGAATATG ACGAGCGTGA CCGGGTGGTA CAGGAGCGGA ACAGCGGCAC GGCAATCCGA CGCCACTATC AGGACACGTC GCATACCGTC ACCCGCAGCC TGCACTGGGA GGGCGAAGAA GACAGTGCGG CACTCACCAG CACCTTCCGT TACAGTGCGA CAGGTGAACT GCGTCAGGTG CAGTTACCGG ATGGCGCGGA GCTGACGCTG GCGCACGACA GTGCGGGTCG GGAGTCTTCC CGGCAGAGTC AGGCTGGCTT TATGCAGCAC CGTGAATACG ATGCCATGGG CTGGCTGACG CGGGAGATGA GCGGCCAGGC GGTGGACGGT CGCCTGCAAC CGACCCAGAC GCGGGAATAC CTCTACGACG GCGCAGGCAA CCTGACCGGC ACCCGACGCA ACCGTGAAGC AGCAGGCTAT CAACTCGATG CCAGCGGACG GGTGCTGTCG GTACTGAGCG GCGGTGCGGG GCGCAGCGTA AACACCGAAG AACAATACCG CTACACCCGT AGCGGCTTAC CACAGGACGC GACCCGCCTG ACCGAATGGC AGGCCGGACG CCTGACCCAG CAGGACAACA CTCACTATCA GTATGACAAG GCCGGACGTC TCATCCGCAA GCAGGTGGTG CAGCCGGGCT ATCGGCCGCA GGTGTGGCAC TACCGTTGGG ACAGCCGCAA CCAGCTCAGG GTTGTGGATA CGCCAGCAGG TGAACGCTGG TTCTACCGTT ACGACCCGTT CGGACGGCGC ATTGGCAAAC GTTGCGACCA AACCCATGAA GACATCCGCT ATCTATGGGA TGGGGACCAG ATAGCCGAAG TACGGCACTA TCGTGACGAT GAATTGGTAT CGCGTCGGCA CTGGATACAC AACGGCTGGG AACTGCTGGT ACAGCAACGG CAGAACGCCG ATGGTCGTTG GGAAACCGAT TTTATGACTA GCAGCCATAA TGGTGAACCG CAGGCAGCTT TTAATCTGGC TGGTGAGCTT CGCTGGCAGG CTCCCCGCAC CAACTTATGG GGGCAGCGCT ATACAGATAA TACTGAAAAC CTTGATCCAG GGCTGGCGTT TGCCGGGCAG TACCGTGACG CGGAAAGTAG CTTATGCTAT AACAGGTTCC GCTATTATGA TCCGAATGGT GGTTATTATA TCTCGCCTGA CCCTGTGAGT ATTTTCGGGG GAGATGTTAA TTACGGATAT GCACATAACC CGCTTGGTTG GGTGGATCCG TTTGGGCTTG CTTCCTGTGA ACACTTAAAC AGAATGGCAA AGGAAGTTCA TGATCTTGCT GGAGGTCTAA AAACCCCAGA CACCCGGGCC ATTAGAAACT CAACAGTTTC AATTGTTGAG GCTACTGTAG ACGGTAAAAA AGTTTTATAT GCAGCTGGTA GTGGTGGCCG TCTTAATCCA AGGCAAGTGG AAACTCTAGA GAGGTTAGGT GTATCTAGGG AAAATATTTT CAAAGGGGCT CGAGTAACAA ATGAATTTTC AAAACTGGAG AATCATGCTG AAAGAATAAT ATTAAGAAAT CTTCCTGAAG GCGCTGTTGT TAATAGGTGG GGAATATCGT GGGGTGGTTT GCAAAGAGGA ATACCTTGCG ACCATTGTGC TCCATTTGTG CGAGATGCTG GTGGTTTTTT TTAG
|
Protein sequence | MREEILSRIA RVGAMHAGNR PKPPPDLPEP GQGKPPTSPG KAIKHSSFWG ALAGAAVGAL IAAAAFTVAA AAVAGAVALT GITGGAGLAL VVGVVKLAVG FGAVFALGDL IGGVTNRVSA MVDSASPSSG AVKDGSKTVF VEGNPVSRAE IDAVLCDKHS GPQLIAQGSA TVFVEGYYAA RVGDKTVCGA TIKEGASTVF FGSGQESPLS VADEFSGWEK ALILAVEFLM PPSRGLFRGL GKLFTKGPMA VLRGMKAGAA HALEGLRSAV QCAKNGFKES KGLARVTESI RGFLKDPVYI ASGEVIEKRL DLELGQTVPL LFERTYRSGS PHSGLLGHGW HDSWSEVATV GRTEQGDIQV TLTLAQGYDI DFTFVVGATV VYCAEYPEFK LVKRHNGFHL WHRDSQTWRA FTAKQGDQLL LSAITDNHRN RIDFLRDPKG YLRKIRHSDG IELLLVWQGE FLRQVQRIDG GQKTVLAEYR QDEQGRLVEA DAAHAYHLFY DYDSHHRLIR WHDNDQTWAR YEYDPQGRCV YTTCADGYLT ANFEYLADRV VMIDGLGQRH EYGFNDLYLM AWEKSPLGHI THYEYDDVGN LLREISPAGR VVEFAYLDNS GLVSTFTDGS GHQWHYDYDH YERLIGITDP LGRSWAWQYD SKGNPLSLTG PDASEVRFAW NRYGLLTEVS DEQGRTQASL FYDHRHRLMS ATDAESRTRQ LRYDQQDRLT SWTRPDGATY RLGYRRASWK LPEQLLRPDD KQEQRQYDKH NNLLNYTDGN GAVWAQTYGP FDLLTSRTDA EGRTWQYEYD KESQQLVCVT APDGNRWQWW LDADARVIRE RDMAGTETHY GYDEDGHCIA VRNGEGETRH FLYDGRGLLI KETAPDDTLH YRYDAAGRLI EVTSSTSHIQ LEYDERDRVV QERNSGTAIR RHYQDTSHTV TRSLHWEGEE DSAALTSTFR YSATGELRQV QLPDGAELTL AHDSAGRESS RQSQAGFMQH REYDAMGWLT REMSGQAVDG RLQPTQTREY LYDGAGNLTG TRRNREAAGY QLDASGRVLS VLSGGAGRSV NTEEQYRYTR SGLPQDATRL TEWQAGRLTQ QDNTHYQYDK AGRLIRKQVV QPGYRPQVWH YRWDSRNQLR VVDTPAGERW FYRYDPFGRR IGKRCDQTHE DIRYLWDGDQ IAEVRHYRDD ELVSRRHWIH NGWELLVQQR QNADGRWETD FMTSSHNGEP QAAFNLAGEL RWQAPRTNLW GQRYTDNTEN LDPGLAFAGQ YRDAESSLCY NRFRYYDPNG GYYISPDPVS IFGGDVNYGY AHNPLGWVDP FGLASCEHLN RMAKEVHDLA GGLKTPDTRA IRNSTVSIVE ATVDGKKVLY AAGSGGRLNP RQVETLERLG VSRENIFKGA RVTNEFSKLE NHAERIILRN LPEGAVVNRW GISWGGLQRG IPCDHCAPFV RDAGGFF
|
| |