| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1607 |
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| Symbol | |
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| ID | 8530002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1742607 |
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| End bp | 1744457 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | |
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| Product | type VI secretion system Vgr family protein |
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| Protein accession | YP_003259004 |
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| Protein GI | 261820898 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCAAACA GTACAGGATT ACAGTTCACG GTAAAGGTCG GTGCCTTGCC CGAAAGCACC
TTTGCGGTGG TGGATTTTCA GCTCAGCGAG GCCCTGAACC AGCCGTTTGC CCTGTCGCTG
AATCTGGCCA GCCCGTTACC GGGCGTCGAC TTTGGCGCGG TACTCGATCA GCCCTGTGAA
CTGCGGGTGT GGTATGAGGG GGAACTCAAA CGCCGGGTCA GTGGCATCAT CAGCGCCTTT
GCCCAGGGTG ATACGGGCTT TCGTCGTACC CGCTATCAGG CAGAGGTTCG CCCGGCATTG
TGGCGGCTGG GGCTGCGCAC CAATGCCCGC ATTTTTCAGG CACAAAAGCC CGAGGACATT
ATTGGTGCGT TGCTGGAAGA GTCCGGTATT ACCGATTACG CCTTTGCGCT GCGTCATGAG
CACGCGCCCC GTGAATACTG TGTGCAGTAT CGGGAAAGCG ATTTGGCCTT TGTCACCCGA
CTGGCAGCGG AAGAAGGCCT GTACTTCTTC CACGAGTTTG AGGCTGGCAA GCACCGGGTG
GTCTTTGCGG ATGATGCCGG GGCGCTCAGT AAAGGCCCGG AACTGTTCTT CAACCTTGCC
ACGCAGGGTC TGAGCGAAGG CGAATACGTC CGCCGCTTTC GCTATGCCGA AGCGGTCAGC
ACCGCCGAGG TTGCTCTCAA GGACTACAGC TTTAAAACCC CGGCCTACGG TCTGCTGCAC
AGCAAGGTGA GCGGTGAGCT GGAACACCAG CGCGAGACCT ACCAGCATTT CGACTATCCG
GGCCGCTTCA AACAAGATCC GAGCGGCAAG GCCTTTACTG GCTATCGGCT GGATGCACTG
CGGGCGGGTG CGATGACTGG CTCGGGTGAA TCCAACGCCG CGATGCTGAT GCCGGGCAGT
AGCTTTACCC TGACTGAACA CCCCAATCCA ACGCTCAACG CTGCCTGGCA ACTGGTGGCC
ATCACGCATA GCGGACAACA GCCGCAGGCA CTGGAAGAAG AGAGCGGCGG CGAACCGACC
ACCTACAGCA ACAGTTTCGA GGTGATCAGT GCCAAATCAA CCTGGCGTGC CGGTCTGCCG
TACAAGCCGA TGGTCGATGG CCCGCAAATC GCCACTGTCG TCGGCCCGGC TGGGGAGGAA
ATCTACTGCG ACGAATACGG GCGCATCAAA CTGCAATTCC CGTGGGACAG ATACGGGGCC
AGCGATGACC AGAGCTCCTG CTGGGTGCGC GTCAGCCAGG GCTGGGCCGG CGGTCAGTAC
GGCCTGATTG CCATCCCGCG TATCGGCCAT GAGGTCATCG TCAGTTTCCT GGAAGGCGAC
CCGGACCAGC CGATTGTGAC GGGCCGTACC TTCCATGCCA CCAATCCGTC GCCGTACCCA
CTGCCCGCGA ACAAGACACG CACCTCGCTG CGAACTTCAA CGCATAAGGG AGCGGGCTTC
AATGAACTGC GCTTTGAAGA CCAGGCCGGG CAGGAAGAAG TGTTTATCCA TGCTCAGAAA
GACATGAACA CCGTGGTGCT GAACAACCGC AGTACCACGG TGACCGCTGA CCATACCGAA
AACGTTGGCG GCAATCAGAC GGTGTCGGTC ATCAAAGACC AGTCCACCGA AATCCAGGGG
CAGCAAACCA TTGCCATCTC CGGTAGCCGC AGCACGGTGG TGGGCGATGT CACAGCAACA
GAAGAAATTC ACGACAGCCT GCAGGTGAAA AACAACATCC TTATCCAATC GATGCAGGGC
AGCATTCTGA TTGCCGCCAA CATCGGTTTT ATCAGTATCA GCGACGAAGG TGACATCACC
ATCAAGGGCA AAACCGTCAC CATCAACGGC AATCGTATCG ACCTGAACTG A
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| Protein sequence | MANSTGLQFT VKVGALPEST FAVVDFQLSE ALNQPFALSL NLASPLPGVD FGAVLDQPCE
LRVWYEGELK RRVSGIISAF AQGDTGFRRT RYQAEVRPAL WRLGLRTNAR IFQAQKPEDI
IGALLEESGI TDYAFALRHE HAPREYCVQY RESDLAFVTR LAAEEGLYFF HEFEAGKHRV
VFADDAGALS KGPELFFNLA TQGLSEGEYV RRFRYAEAVS TAEVALKDYS FKTPAYGLLH
SKVSGELEHQ RETYQHFDYP GRFKQDPSGK AFTGYRLDAL RAGAMTGSGE SNAAMLMPGS
SFTLTEHPNP TLNAAWQLVA ITHSGQQPQA LEEESGGEPT TYSNSFEVIS AKSTWRAGLP
YKPMVDGPQI ATVVGPAGEE IYCDEYGRIK LQFPWDRYGA SDDQSSCWVR VSQGWAGGQY
GLIAIPRIGH EVIVSFLEGD PDQPIVTGRT FHATNPSPYP LPANKTRTSL RTSTHKGAGF
NELRFEDQAG QEEVFIHAQK DMNTVVLNNR STTVTADHTE NVGGNQTVSV IKDQSTEIQG
QQTIAISGSR STVVGDVTAT EEIHDSLQVK NNILIQSMQG SILIAANIGF ISISDEGDIT
IKGKTVTING NRIDLN
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