| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1586 |
|---|
| Symbol | |
|---|
| ID | 8529976 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1714725 |
|---|
| End bp | 1716002 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003258984 |
|---|
| Protein GI | 261820878 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.97396 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCACTTA CTGATACTAA AGTAAAAAAT GCCAAGCCGT CAGAAAAGGT GGTTAAGCTC
ACTGACGGGT TCGGCCTCTA CCTGCTGGTA CATCCCAACG GTTCCAAATA CTGGCAGTTA
GGCTATCGCT TCGAAGGAAA ACAGAAGGTG TTCTCCATCG GTGTCTACCC TGCTGTTTCT
CTGGCTGATG CCAGACAACG ACGAGATGAA GCAAAAAAGC TGTTAGCGGC TGGCATTGAC
CCCAGCGCCA AAAAACAGGC TGACAACAAA ATCGTTCAAG AGCGGCGTAA CAACACCCGC
GCTTTCAAAA CGGTTGCCAA AAGCTGGTTT ACCACCAAAA CCACATGGTC GGAAGATTAT
CAGCGCTCTG TTTGGACCCG ACTGGAAACT TACCTGTTCC CTGATATTGG TAACAAGGAC
ATTGCTGAAC TGGATACAGG CGATCTGCTG GTTCCCATCA AAAAGATAGA GAAGCTGGGC
TATCTGGAAA TTGCCATGCG GGTGAAACAG TACGCTACCG CCATCATGCG TTATGCCGTC
CAGCAAAAGA TGATCCGTTT CAATCCGGCC TATGATTTGG AAGGTGCGGT TCAGAAGCCA
CAAACGGAAC ACCGCCCCGC TATCGAACTG GAAGAGATAC CTACCCTACT GGAACGTATT
GAAGCCTATA AAGGCCGTAG CAGGCTGACC CAATTAGCGA TAAAACTCAA TCTGCTAATT
TTTGTCCGTT CAAGTGAACT CCGCTTTGCC CGCTGGTCAG AGATCGATTT CAAAAGCGCT
TTGTGGGTTA TCCCTGAACA GCGTGAAGCC ATAAAAGGGA TCAAGCATTC AGGCCGTGGT
GCCAAAATGC GTAGGAAGCA TTATGTTCCA CTGTGCCATC AGGCGCTGGC AATTTTGGAA
GAGCTGAAAG ACCTCACCTA TGACGTTAAC GGTGATGACG GCTTTATCCT GACTGGCTGT
TATGATGCGA TGAAACCTAT GAGCGAAAAC ACCATCAACA AGGCACTGCG CAAAATGGGC
TATGACACCA AAACCGATTT GTGTGGTCAT GGTTTCCGAA CGCTGGCGTG TAGTGCCTTA
ATTGAATCGG GGATCTGGCC TGAAGATGTG GTTGAGCTTC AAATGAGCCA CATGGAAAAG
AACAACGTTC GCGCCGCCTA TACTCATAAG GCCAAACATC TTGAACAACG CCGCTTGATG
TTGCAATGGT GGGCCGATTT TCTGGATGCG AACAGCAACG GTATGGTTAG ACCGTTTGAG
TTTGCGCAGA AGGGATAA
|
|---|
| Protein sequence | MSLTDTKVKN AKPSEKVVKL TDGFGLYLLV HPNGSKYWQL GYRFEGKQKV FSIGVYPAVS
LADARQRRDE AKKLLAAGID PSAKKQADNK IVQERRNNTR AFKTVAKSWF TTKTTWSEDY
QRSVWTRLET YLFPDIGNKD IAELDTGDLL VPIKKIEKLG YLEIAMRVKQ YATAIMRYAV
QQKMIRFNPA YDLEGAVQKP QTEHRPAIEL EEIPTLLERI EAYKGRSRLT QLAIKLNLLI
FVRSSELRFA RWSEIDFKSA LWVIPEQREA IKGIKHSGRG AKMRRKHYVP LCHQALAILE
ELKDLTYDVN GDDGFILTGC YDAMKPMSEN TINKALRKMG YDTKTDLCGH GFRTLACSAL
IESGIWPEDV VELQMSHMEK NNVRAAYTHK AKHLEQRRLM LQWWADFLDA NSNGMVRPFE
FAQKG
|
|---|
| |