Gene Pecwa_1574 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1574 
Symbol 
ID8529964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp1706892 
End bp1707548 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content43% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003258974 
Protein GI261820868 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.0374767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTC AGCAATTTGA ATATGGGGCA CAGCACTCAA CGCCATGGCA TAAACATTCA 
TCTGGGCAGT TATACTGGCT TAGAGAGGGG ATCATCGTTA TTGAGACTGT CCTTGCGCAG 
TGGACTGTTA CGCCCGGTTC CGTAGGATGG TTTCCACCAG ATTTGAATCA CAGAGCTTGG 
GTACCCGGAA ATGTAATAGG CAATAGCCTT TATCTTGACC CTGTGTCCAG TAATCATTTT 
CCTTATCATG CAGGTATTTA TGGTGCTGAT CATTTTATTA TTGCTTTGCT GGAACGGTGT 
AATAATAGTC ACATTAAGCA CTCTGAAGAG TATGAGAACC TCATTTCGAA CCTGCTAGGT 
TATGAAATAA GACAATGTTC TGAGTTGCCA CTTGAGTTAA AATTACCAAC AGATCGTCGG 
GCTAGAAATG TAGCCAGTGA ATTATTAAAA AATCCGGGGT GTATTCTTGA TCAAAGCCAA 
TTGGCCCAGA AATGGGGGCT TAGTGTCAGA AACCTTAGTC GCTTGTTCAA TCAGCAAACT 
GGCCTTAGTT TTAGCCAGTG GCGACAACAG GCAAAAGTAG TGGCTTCGCT CCAGTGGGTA 
CTTTTAGGGC TACCAGTTAA TGAAGTTGCA TCGCTCAGTG GCTACATATA TTCATAA
 
Protein sequence
MKIQQFEYGA QHSTPWHKHS SGQLYWLREG IIVIETVLAQ WTVTPGSVGW FPPDLNHRAW 
VPGNVIGNSL YLDPVSSNHF PYHAGIYGAD HFIIALLERC NNSHIKHSEE YENLISNLLG 
YEIRQCSELP LELKLPTDRR ARNVASELLK NPGCILDQSQ LAQKWGLSVR NLSRLFNQQT 
GLSFSQWRQQ AKVVASLQWV LLGLPVNEVA SLSGYIYS