Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1558 |
Symbol | |
ID | 8529948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1696056 |
End bp | 1696670 |
Gene Length | 615 bp |
Protein Length | 204 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003258960 |
Protein GI | 261820854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.231141 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTACAC ATATGAATAC ACATTCCCCA CGCGGCCCGT CGGACCATAG CGTCCGCGAT CAGATTGTTG ACGCTGCCAC TGAGCACTTC GGACATTTTG GATATGAAAA GACAGCCGTG TCCGATCTGG CCAAAGCGAT TGGTTTTTCT AAGGCATATA TCTACAAATT TTTTGATTCC AAACAGGCTA TCGGCGAGGT GATCTGCGCT AACCGGCTGG CGATGATTAT GGATATTGTC AATTCAGCGA TCGTGGATGC GCCAACCGCT TCAGAAAAGC TGAGACGCCT GTTCAGAGCC TTGACAGAAG CGTGTAGCGA CTTATTTTTT CATGACCGCA AGATTTATGA TATTGCCGCG GTATCCTCTC GCGACCGGTG GCCTTCAGCC GCGGCATATG AAGAAAAGCT ACGCCAGCTT ATTCAGCAAA TTCTTCTTGA GGGACGACAA TCCGGGGAGT TTGAACGCAA GACGCCGTTA GATGAGACGG CGAATGCGAT CTATCTGGTC ATGCTCCCTT ATATCAGCCC TGTTCAATTG CAATACAACC TGGATACGGC AGCATCAGCG GCGGTATTAC TGTCGTCGTT GATATTACGT AGTCTGGCAC CTTAA
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Protein sequence | MTTHMNTHSP RGPSDHSVRD QIVDAATEHF GHFGYEKTAV SDLAKAIGFS KAYIYKFFDS KQAIGEVICA NRLAMIMDIV NSAIVDAPTA SEKLRRLFRA LTEACSDLFF HDRKIYDIAA VSSRDRWPSA AAYEEKLRQL IQQILLEGRQ SGEFERKTPL DETANAIYLV MLPYISPVQL QYNLDTAASA AVLLSSLILR SLAP
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