Gene Pecwa_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1558 
Symbol 
ID8529948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand+ 
Start bp1696056 
End bp1696670 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content49% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003258960 
Protein GI261820854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.231141 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACAC ATATGAATAC ACATTCCCCA CGCGGCCCGT CGGACCATAG CGTCCGCGAT 
CAGATTGTTG ACGCTGCCAC TGAGCACTTC GGACATTTTG GATATGAAAA GACAGCCGTG 
TCCGATCTGG CCAAAGCGAT TGGTTTTTCT AAGGCATATA TCTACAAATT TTTTGATTCC 
AAACAGGCTA TCGGCGAGGT GATCTGCGCT AACCGGCTGG CGATGATTAT GGATATTGTC 
AATTCAGCGA TCGTGGATGC GCCAACCGCT TCAGAAAAGC TGAGACGCCT GTTCAGAGCC 
TTGACAGAAG CGTGTAGCGA CTTATTTTTT CATGACCGCA AGATTTATGA TATTGCCGCG 
GTATCCTCTC GCGACCGGTG GCCTTCAGCC GCGGCATATG AAGAAAAGCT ACGCCAGCTT 
ATTCAGCAAA TTCTTCTTGA GGGACGACAA TCCGGGGAGT TTGAACGCAA GACGCCGTTA 
GATGAGACGG CGAATGCGAT CTATCTGGTC ATGCTCCCTT ATATCAGCCC TGTTCAATTG 
CAATACAACC TGGATACGGC AGCATCAGCG GCGGTATTAC TGTCGTCGTT GATATTACGT 
AGTCTGGCAC CTTAA
 
Protein sequence
MTTHMNTHSP RGPSDHSVRD QIVDAATEHF GHFGYEKTAV SDLAKAIGFS KAYIYKFFDS 
KQAIGEVICA NRLAMIMDIV NSAIVDAPTA SEKLRRLFRA LTEACSDLFF HDRKIYDIAA 
VSSRDRWPSA AAYEEKLRQL IQQILLEGRQ SGEFERKTPL DETANAIYLV MLPYISPVQL 
QYNLDTAASA AVLLSSLILR SLAP