| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1535 |
|---|
| Symbol | |
|---|
| ID | 8529925 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1667028 |
|---|
| End bp | 1668605 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | cytochrome bd ubiquinol oxidase subunit I |
|---|
| Protein accession | YP_003258939 |
|---|
| Protein GI | 261820833 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.131601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGATG TCGTCGAGCT GTCGCGGCTG CAATTTGCCC TGACTGCCAT GTACCACTTT
CTTTTCGTCC CTCTGACGCT GGGATTGTCT TTCCTGCTGG CCATTATGAA CACCACATAC
GTGTTAACCG GCAAGCAAAT CTACAAAGAT ATGACCAAAT TCTGGGGCAA GCTGTTCGCT
ATCAATTTTG CACTGGGTGT AGCAACCGGC CTGACGCTGG AATTCCAGTT CGGTACTAAC
TGGTCTTACT ATTCTCACTA TGTGGGCGAT ATTTTTGGCG CGCCGCTGGC GATGGAAGGG
CTGATGGCGT TCTTCCTGGA ATCCACGCTG GTTGGTCTGT TCTTTTTCGG CTGGGATCGC
CTGACCAAAG TCCAGCATAT GCTGGTGACC TGGTTCGTTG CGCTGGGCTC CAACTTCTCC
GCCCTGTGGA TTTTGGTCGC CAACGGCTGG ATGCAAAATC CGATTGCCGC CGAATTCAAT
TACGAAACCA TGCGTATGGA AATGTTGAGC TTCGCCGAAC TGGTGTTGAA CCCCGTCGCA
CAGGTGAAAT TCGTACATAC CGTGGCAGCA GGCTACACCG CCGGTGCAAT GTTCGTGCTG
GGTATCAGTT CTTACTATTT GTTGAGGGGC AGAGATATCG CGTTTGCCAA GCGTTCGTTC
GCCATTGCCG CTAGTTTCGG TTTGGCCTCG GTGCTGTCCG TCATCGTACT GGGTGATGAA
TCCGGTTATG TGATGGGCGA TGTGCAAAAA ACCAAGCTGG CAGCGATCGA AGCCGAGTGG
GAAACGCAGC CCGCACCTGC CGCTTTCACG CTGTTCTCTA TTCCTAATCA GGAGACGATG
CAGAACGATT ACGCCGTCCA TATTCCTTAC CTGTTGGGGT TGATTGCCAC CCGTTCGCTC
GACAAACCCG TCGTCGGTAT TAAAGACTTG ATGGCGCAGC ATGAGATACG TATTCGTAAC
GGTATGGCAG CCTATGACCT GCTGGAGGAA CTGCGCTCAG GCAACAGCGA TCCCACCGTT
CGCGCACGTT TTGAAGCTGC CAAGCACGAT CTTGGCTACG GCATGCTGCT TAAGCGCTAT
ACCGATGACG TTGCCAACGC CAGTGAAAAT CAGATTCAGC AGGCAACAAA GGATTCGATT
CCTCGCGTCG CACCGCTGTA TATCGCGTTT CGTCTGATGG TGGGTTGTGG CGTGCTGATG
CTCGCTATTT TTGCCCTGTC GTTCTGGAGC GTGATTTGCG GCCACATGGG GCAACGTAAA
TGGCTGCACC GCGTGGCGCT GTACGGCATT CCCCTGCCCT GGATCGCCAT TGAATCCGGC
TGGTTTATCG CTGAATACGG TCGTCAACCC TGGGCCGTCG CCGAAGTTCT GCCTACCGCT
ATCGCCAATT CGTCTCTGGA AGCACACGAT ATTCTGCTGT CGATGGGGCT GATTTGTGGG
CTGTATACGC TATTTCTGGT CGCGGAACTG TATCTGATGT TCAAGTTTGC TCGACTGGGG
CCAAGTAGCC TGAAAACCGG CCGCTACCAC TTTGAACAGC CGACAACACC GCCACGCGCC
GCACCTGCGA AACCTTAA
|
|---|
| Protein sequence | MFDVVELSRL QFALTAMYHF LFVPLTLGLS FLLAIMNTTY VLTGKQIYKD MTKFWGKLFA
INFALGVATG LTLEFQFGTN WSYYSHYVGD IFGAPLAMEG LMAFFLESTL VGLFFFGWDR
LTKVQHMLVT WFVALGSNFS ALWILVANGW MQNPIAAEFN YETMRMEMLS FAELVLNPVA
QVKFVHTVAA GYTAGAMFVL GISSYYLLRG RDIAFAKRSF AIAASFGLAS VLSVIVLGDE
SGYVMGDVQK TKLAAIEAEW ETQPAPAAFT LFSIPNQETM QNDYAVHIPY LLGLIATRSL
DKPVVGIKDL MAQHEIRIRN GMAAYDLLEE LRSGNSDPTV RARFEAAKHD LGYGMLLKRY
TDDVANASEN QIQQATKDSI PRVAPLYIAF RLMVGCGVLM LAIFALSFWS VICGHMGQRK
WLHRVALYGI PLPWIAIESG WFIAEYGRQP WAVAEVLPTA IANSSLEAHD ILLSMGLICG
LYTLFLVAEL YLMFKFARLG PSSLKTGRYH FEQPTTPPRA APAKP
|
|---|
| |