Gene Pecwa_1504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1504 
Symbol 
ID8529895 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1632016 
End bp1633473 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content53% 
IMG OID 
ProductNADH dehydrogenase subunit N 
Protein accessionYP_003258910 
Protein GI261820804 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAA CTCTTCAACA ACTAATTGCG CTATCGCCGC TGTTGATCGT CGGATTGACG 
GTAGTGGTTG TGATGCTGTG CATTGCGTGG CGACGCAACC ATTTTGTCAA CGCAACCATG
ACGGTTATCG GCCTGAATAT TGCGTTGCTG TCACTGTACT TTGTTGGTCA GGCTGGCCCG
ACAGACGTGA CACCGTTGCT GCGTGTTGAT GGCTTCTCGA TGTTTTATAC CGGACTGGTT
CTACTTGCCA GTCTGGCAAC CAGTACGTTT GCCTATCCGT GGCTGCAAGG CTACCCAGAC
AACCGTGATG AGTTCTACCT GCTGGTTCTG ATTGCTGCGT TAGGTGGGAT CCTGCTGTCG
AGCGCCAATC ATCTGGCTTC GTTGTTCATC GGTATTGAAC TGCTTTCACT TCCGCTGTTT
GGTCTGGTCG GCTATGCCTT CCGTCTGAAA CGTTCGCTGG AAGCCAGTAT TAAATACATG
TTGCTGTCGG CGGCGGCGTC TTCCTTCCTG CTGTTTGGTA TGGCGCTGAT TTATGCTGAA
TCGGGCGATA TGAGCTTTGC CAGCCTCGGT AAGAGCCTGA GCGATCACCA AATCCATGAG
CCGCTGTTGC TGGCTGGTCT GGGGCTGATG ATTGTCGGTC TGGGCTTTAA ACTGTCTCTG
GTTCCGTTCC AACTGTGGAC ACCTGATGTG TATCAGGGGG CACCAGCACC CGTGTCTACG
TTTCTGGCGA CGGCAGGTAA GATTGCGGTT TTCGGTGCGG TCATGCGTTT ATTCCTGTAC
GCACCGATGG CTGACAGTGA ATCCGTCAGA ATCGTGCTGG GCGTTATCGC GTTCGCGTCG
ATCCTGTTCG GTAACGTAAT GGCTGTGTCG CAAACTAACA TCAAGCGTCT GCTCGGCTAC
TCTTCCATTG CGCATCTGGG CTATTTGCTG GTTGCCCTGA TCGCGGTTCA GAGTCATCAG
TTGGCGCTGG AAACCGTTGG CGTTTATCTG GTGGGTTATC TGTTCAGCAG TCTGGGGGCG
TTCGGTGTGG TTAGCCTGAT GTCCAGCCCG TATCGTGGCC CGGATGCCGA TTCACTGTTC
TCTTACCGTG GCTTGTTCTG GCATAAACCG ATTCTGTCTG CGGTCATGAC GGTGATGATG
CTGTCTCTGG CGGGTATCCC GATGACGCTG GGCTTCTTCG GTAAGTTCTA CGTGTTGGCT
GTCGGCGTGA ATGCTGAACT GTGGTGGTTG ACCGGTGCCG TCGTGCTGGG TAGCGCTATT
GGTTTGTACT ACTACCTGCG TGTGATGGTC AGTTTGTTCC TGAATGCACC TCAACAGCTA
CAGCGTGATA CACCAAATAA CTGGGCCTTA ACGGCTGGCG GTGTGGTCGT ATTGATCTCC
TCCATTGCGG TGCTGTTCCT TGGTTTGTAC CCGCAACCGC TTATCTCTCT GGTGCAGTTG
GCGCAGCCAA TGATGTAA
 
Protein sequence
MTITLQQLIA LSPLLIVGLT VVVVMLCIAW RRNHFVNATM TVIGLNIALL SLYFVGQAGP 
TDVTPLLRVD GFSMFYTGLV LLASLATSTF AYPWLQGYPD NRDEFYLLVL IAALGGILLS
SANHLASLFI GIELLSLPLF GLVGYAFRLK RSLEASIKYM LLSAAASSFL LFGMALIYAE
SGDMSFASLG KSLSDHQIHE PLLLAGLGLM IVGLGFKLSL VPFQLWTPDV YQGAPAPVST
FLATAGKIAV FGAVMRLFLY APMADSESVR IVLGVIAFAS ILFGNVMAVS QTNIKRLLGY
SSIAHLGYLL VALIAVQSHQ LALETVGVYL VGYLFSSLGA FGVVSLMSSP YRGPDADSLF
SYRGLFWHKP ILSAVMTVMM LSLAGIPMTL GFFGKFYVLA VGVNAELWWL TGAVVLGSAI
GLYYYLRVMV SLFLNAPQQL QRDTPNNWAL TAGGVVVLIS SIAVLFLGLY PQPLISLVQL
AQPMM