Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1504 |
Symbol | |
ID | 8529895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1632016 |
End bp | 1633473 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | NADH dehydrogenase subunit N |
Protein accession | YP_003258910 |
Protein GI | 261820804 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACAATAA CTCTTCAACA ACTAATTGCG CTATCGCCGC TGTTGATCGT CGGATTGACG GTAGTGGTTG TGATGCTGTG CATTGCGTGG CGACGCAACC ATTTTGTCAA CGCAACCATG ACGGTTATCG GCCTGAATAT TGCGTTGCTG TCACTGTACT TTGTTGGTCA GGCTGGCCCG ACAGACGTGA CACCGTTGCT GCGTGTTGAT GGCTTCTCGA TGTTTTATAC CGGACTGGTT CTACTTGCCA GTCTGGCAAC CAGTACGTTT GCCTATCCGT GGCTGCAAGG CTACCCAGAC AACCGTGATG AGTTCTACCT GCTGGTTCTG ATTGCTGCGT TAGGTGGGAT CCTGCTGTCG AGCGCCAATC ATCTGGCTTC GTTGTTCATC GGTATTGAAC TGCTTTCACT TCCGCTGTTT GGTCTGGTCG GCTATGCCTT CCGTCTGAAA CGTTCGCTGG AAGCCAGTAT TAAATACATG TTGCTGTCGG CGGCGGCGTC TTCCTTCCTG CTGTTTGGTA TGGCGCTGAT TTATGCTGAA TCGGGCGATA TGAGCTTTGC CAGCCTCGGT AAGAGCCTGA GCGATCACCA AATCCATGAG CCGCTGTTGC TGGCTGGTCT GGGGCTGATG ATTGTCGGTC TGGGCTTTAA ACTGTCTCTG GTTCCGTTCC AACTGTGGAC ACCTGATGTG TATCAGGGGG CACCAGCACC CGTGTCTACG TTTCTGGCGA CGGCAGGTAA GATTGCGGTT TTCGGTGCGG TCATGCGTTT ATTCCTGTAC GCACCGATGG CTGACAGTGA ATCCGTCAGA ATCGTGCTGG GCGTTATCGC GTTCGCGTCG ATCCTGTTCG GTAACGTAAT GGCTGTGTCG CAAACTAACA TCAAGCGTCT GCTCGGCTAC TCTTCCATTG CGCATCTGGG CTATTTGCTG GTTGCCCTGA TCGCGGTTCA GAGTCATCAG TTGGCGCTGG AAACCGTTGG CGTTTATCTG GTGGGTTATC TGTTCAGCAG TCTGGGGGCG TTCGGTGTGG TTAGCCTGAT GTCCAGCCCG TATCGTGGCC CGGATGCCGA TTCACTGTTC TCTTACCGTG GCTTGTTCTG GCATAAACCG ATTCTGTCTG CGGTCATGAC GGTGATGATG CTGTCTCTGG CGGGTATCCC GATGACGCTG GGCTTCTTCG GTAAGTTCTA CGTGTTGGCT GTCGGCGTGA ATGCTGAACT GTGGTGGTTG ACCGGTGCCG TCGTGCTGGG TAGCGCTATT GGTTTGTACT ACTACCTGCG TGTGATGGTC AGTTTGTTCC TGAATGCACC TCAACAGCTA CAGCGTGATA CACCAAATAA CTGGGCCTTA ACGGCTGGCG GTGTGGTCGT ATTGATCTCC TCCATTGCGG TGCTGTTCCT TGGTTTGTAC CCGCAACCGC TTATCTCTCT GGTGCAGTTG GCGCAGCCAA TGATGTAA
|
Protein sequence | MTITLQQLIA LSPLLIVGLT VVVVMLCIAW RRNHFVNATM TVIGLNIALL SLYFVGQAGP TDVTPLLRVD GFSMFYTGLV LLASLATSTF AYPWLQGYPD NRDEFYLLVL IAALGGILLS SANHLASLFI GIELLSLPLF GLVGYAFRLK RSLEASIKYM LLSAAASSFL LFGMALIYAE SGDMSFASLG KSLSDHQIHE PLLLAGLGLM IVGLGFKLSL VPFQLWTPDV YQGAPAPVST FLATAGKIAV FGAVMRLFLY APMADSESVR IVLGVIAFAS ILFGNVMAVS QTNIKRLLGY SSIAHLGYLL VALIAVQSHQ LALETVGVYL VGYLFSSLGA FGVVSLMSSP YRGPDADSLF SYRGLFWHKP ILSAVMTVMM LSLAGIPMTL GFFGKFYVLA VGVNAELWWL TGAVVLGSAI GLYYYLRVMV SLFLNAPQQL QRDTPNNWAL TAGGVVVLIS SIAVLFLGLY PQPLISLVQL AQPMM
|
| |