Gene Pecwa_1500 details

Gene Information

• Locus tag: Pecwa_1500
• ID: 8529891
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1627667
• End bp: 1628227
• Gene Length: 561 bp
• Protein Length: 186 aa
• Translation table: 11
• GC content: 50%
• Product: NADH dehydrogenase subunit J
• Protein accession: YP_003258906
• Protein GI: 261820800

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAATTCG CTTTTTATAC CACAGGTTTG ATTGCGATAC TGGCGACACT GCGCGTCATT 
ACGCATACCA ATCCTGTGCA TGCATTGTTG TATATGGTCA CCTCGCTTAT GGCGATTGCG 
GGCGTCTTTT TCTCGCTGGG GGCTAATTTT GCTGGCGCGC TGAGCATCAT CGTCTATGCC 
GGCGCCATCA TGGTGCTGTT TGTGTTCGTG GTTATGATGC TCAACCTCGG TAATTCTGTA 
GAAGAACAAG AGCGGAATTG GCTGAAGCCC AGCGTCTGGA TTGGCCCAAG CATTTTGTCA 
CTGGCGTTAC TGGTGATTGT GGTTAACGCC ATCCTTAGCC TGAAAGAGCA GGGCATCACT 
GGCACGCCTG TTGAGGCGAA AGCCGTAGGT ATCAGCCTGT TTGGTCCTTA TGTTCTGGCG 
GTTGAATTAG CGTCAATGCT ACTGCTGGCG GGATTGGTTG TCGCTTTCCA CATTGGTCGT 
GAAGATAAAC GTGGTGACGT TGTCAATAAA GAAGGCGCAA ACCAGGATGT TGAGAAAAAA 
ATAACGGGGG AACGCGCATG A 

 

Protein sequence

MEFAFYTTGL IAILATLRVI THTNPVHALL YMVTSLMAIA GVFFSLGANF AGALSIIVYA 
GAIMVLFVFV VMMLNLGNSV EEQERNWLKP SVWIGPSILS LALLVIVVNA ILSLKEQGIT 
GTPVEAKAVG ISLFGPYVLA VELASMLLLA GLVVAFHIGR EDKRGDVVNK EGANQDVEKK 
ITGERA