| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1476 |
|---|
| Symbol | |
|---|
| ID | 8529867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1600191 |
|---|
| End bp | 1600964 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | histidine/lysine/arginine/ornithine transporter subunit |
|---|
| Protein accession | YP_003258882 |
|---|
| Protein GI | 261820776 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.307968 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAATA ACAAATTGAT GGTGACGGAA CTGCGTAAAC GTTATGGCCA GCATGAGGTA
CTTAAAGGGA TCTCATTGCA GGCGAAAGCG GGTGACGTTA TTTCGATTAT CGGGTCGTCT
GGGTCGGGGA AAAGTACCTT ACTGCGCTGC ATTAATTTTC TGGAAAAGCC CTGTGAAGGG
GCGATTTACG TCAGCAATCA GGAAATCCGC ATGGTACGTG ATACTGACGG ACAACTGAAG
GTCTTTGATA AAAAGCAGCT TCAGATGCTG CGGACGCGTC TGACGATGGT GTTTCAGCAC
TTCAACCTGT GGAGCTTCAT GACCGCGTTG GAGAACGTGA TGGAAGCGCC GATCCAGGTA
TTAGGGCTTA GTAAAGCGGA AGCGCGTGAG CGGGCGGTGT TCTACCTGAA TAAGGTTGGG
ATCACGGATT CTGCCCAACA GAAATACCCG TCGGATCTCT CCGGTGGCCA GCAGCAGCGC
GTATCTATTG CGCGAGCGCT GGCGATGGAG CCAGAAGTAC TGCTATTTGA TGAACCGACG
TCGGCGCTCG ACCCTGAACT GGTGGGTGAG GTACTGCGCA TCATGCAGCA GTTGGCGGAG
GAGGGGAAAA CGATGGTGGT GGTGACGCAT GAGATGGAGT TTGCCCGTCA TGTCTCCAGC
CACGTTATCT TCCTGCACCA AGGGGTGATC GAAGAGGAAG GGCCGCCGGA GCAACTCTTC
GGTAGCCCGA AAAGTGCGCG GTTGCAGCAG TTTTTATCAG GTGCATTGAA GTAG
|
|---|
| Protein sequence | MSNNKLMVTE LRKRYGQHEV LKGISLQAKA GDVISIIGSS GSGKSTLLRC INFLEKPCEG
AIYVSNQEIR MVRDTDGQLK VFDKKQLQML RTRLTMVFQH FNLWSFMTAL ENVMEAPIQV
LGLSKAEARE RAVFYLNKVG ITDSAQQKYP SDLSGGQQQR VSIARALAME PEVLLFDEPT
SALDPELVGE VLRIMQQLAE EGKTMVVVTH EMEFARHVSS HVIFLHQGVI EEEGPPEQLF
GSPKSARLQQ FLSGALK
|
|---|
| |