Gene Pecwa_1475 details

Gene Information

• Locus tag: Pecwa_1475
• ID: 8529866
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1599460
• End bp: 1600176
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 53%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003258881
• Protein GI: 261820775

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.480375
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATGAGA TCCTGCAACA ATACTGGCAA CCGCTACTGT GGAGCGATGG TTATCGTCTA 
ACCGGGCTGG CGATGACGCT CTGGCTGCTG ATTTCCTCAG TAGTGATCGG TGGACTGATG 
GCACTGCCGC TGGCGATTGC CCGCGTGTCG CCGCGGCGCC GGTTCAGCTT CCCAGTTTGG 
CTCTTTACCT ATGTATTCCG AGGTACGCCG CTCTACGTGC AACTCCTGGT GTTCTATTCC 
GGCGTGTATA GCCTGGAAAT CGTGCGCGGC ACCGATCTGC TGAACGCTTT TTTTCGCAGC 
GGGCTGAACT GCGCCATTTT AGCGCTGGCG CTCAATACCT CTGCGTATAC TACAGAGATT 
TTCGCGGGGG CAATCCGCTC TGTACCGCAT GGGGAAATTG AAGCCGCCAG AGCATACGGT 
TTCTCCCGTT TTAAGCAGTA TCGCTGCATT ATTTTGCCGA GTGCGCTGCG TATTGCACTG 
CCAGCCTACA GTAACGAAGT GATTCTGATG CTGCATTCGA CGGCGCTGGC TTTTACCGTG 
ACGGTGCCGG ATATTCTGAA AATCGCACGC GATATTAATG CTGCTACCTA CCAGCCGTTT 
TATGCGTTTG GCATCGCAGC GGTGATCTAT CTGGCGATCT CATTTGTATT AATCGGGCTG 
TTCAGAAGGG CAGAGCGACG CTGGTTACGT CATCTTTATA CCCGTTCATC TCATTAA 

 

Protein sequence

MNEILQQYWQ PLLWSDGYRL TGLAMTLWLL ISSVVIGGLM ALPLAIARVS PRRRFSFPVW 
LFTYVFRGTP LYVQLLVFYS GVYSLEIVRG TDLLNAFFRS GLNCAILALA LNTSAYTTEI 
FAGAIRSVPH GEIEAARAYG FSRFKQYRCI ILPSALRIAL PAYSNEVILM LHSTALAFTV 
TVPDILKIAR DINAATYQPF YAFGIAAVIY LAISFVLIGL FRRAERRWLR HLYTRSSH