Gene Pecwa_1474 details

Gene Information

• Locus tag: Pecwa_1474
• ID: 8529865
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1598778
• End bp: 1599467
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 53%
• Product: polar amino acid ABC transporter, inner membrane subunit
• Protein accession: YP_003258880
• Protein GI: 261820774

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 0.996981
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCTATG GCTATGCTCC GCTAATTTTG GATGGTGCCA TCATGACGCT GGAGTTGGCG 
GTGAGTTCGC TGCTGCTGGC GCTGGTTATC GGCCTGATGG GGGCGTCGGC GAAGCTGTCT 
TCCAACCGCC TGCTGGTAGG GGGCTTTTCT TGCTATACCA CGTTGATTCG CGGCATTCCT 
GATTTGGTGC TGATGCTGCT GATTTTCTAT GGCTTACAAA TCGTCTTAAA CGGCGTGACG 
GAATCGATCG GTCTGGAGCA GATTGATATC GATCCTTTGA CTGCAGGGGT GATTACGCTG 
GGCTTTATTT ACGGTGCCTA TTTCACGGAA ACCTTTCGTG GTGCTTATCT TGCCGTACCG 
CGCGGACAGA TCGAAGCGGC GGTGGCGTTC GGTTTCTCTC CTCTAAAAGT ATTCCGCCGT 
ATTCTGTTTC CTTCCATGAT GCGCTTCGCG CTACCGGGGA TCGGCAATAA CTGGCAGGTG 
ATCCTGAAAG CGACGGCGCT GGTGTCATTG CTTGGCCTGA ATGATGTGAT TAAGGCGACG 
CAACTGGCAG GCAAGGGCGC TCACGAACCG TTTTATTTCG CACTGGTTGC CGGGGCGATG 
TATCTGATTT TTACCACCGT TTCTAACGGT GTGTTGTGGT GGCTGGAGCG GCACTATTCG 
CAGGGAGTCA AGAAAGTAAA CTATGAATGA 

 

Protein sequence

MLYGYAPLIL DGAIMTLELA VSSLLLALVI GLMGASAKLS SNRLLVGGFS CYTTLIRGIP 
DLVLMLLIFY GLQIVLNGVT ESIGLEQIDI DPLTAGVITL GFIYGAYFTE TFRGAYLAVP 
RGQIEAAVAF GFSPLKVFRR ILFPSMMRFA LPGIGNNWQV ILKATALVSL LGLNDVIKAT 
QLAGKGAHEP FYFALVAGAM YLIFTTVSNG VLWWLERHYS QGVKKVNYE