| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1471 |
|---|
| Symbol | |
|---|
| ID | 8529862 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1595150 |
|---|
| End bp | 1596667 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | amidophosphoribosyltransferase |
|---|
| Protein accession | YP_003258877 |
|---|
| Protein GI | 261820771 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGTA TTGTCGGTAT CGCCGGTTTT ACACCGGTCA ACCAGTCGAT TTATGACGCG
TTAACGGTGT TGCAACACCG TGGGCAGGAC GCTGCGGGTA TTGTAACCAT CGATGCCTTT
AATTGTTTTC GCCTGCGTAA GGCCAATGGC CTGGTGAAAG ATGTGTTTGA GGCGCGGCAC
ATGCAACGCT TACAGGGAAA CATGGGGCTT GGACATGTGC GTTATCCGAC GGCGGGCAGT
TCCAGCGCTT CGGAAGCACA GCCTTTCTAT GTTAACTCTC CGTTCGGCAT CACGCTGGCT
CATAACGGTA ACCTGACGAA CGCCCACGAA CTGCGTAAAA AGCTGTTCGA GCAGGAGCGT
CGTCACGTTA ACACCACGTC TGATTCTGAA ATTCTGCTGA ATATTTTCGC CAGAGAGCTG
GACCGTTTCC AACATTACCC GCTGGAAGCC GATAATATTT TTGCGGCCGT TGCTGCAACG
CACCAGCAAA TTCGCGGCGC CTATGCCTGT GTTGGCATGA TTATCGGTCA TGGCATGGTG
GCGTTCCGCG ATCCTAACGG TATTCGTCCG CTGGTTATCG GTAAACGCGA CCTGGAAGAT
GGCCGCAGTG AATACATGGT AGCGTCAGAA AGTGTTGCGT TGGATACGCT GGGCTTTGAG
TTTTTACGCG ATGTTGCGCC GGGAGAAGCG ATCTACATTA CGGAAAAAGG ACAACTGTTT
ACCCGCCAGT GCGCAGAAAA TCCAAAGAGC AACCCGTGCC TGTTCGAATA TGTGTACTTC
GCTCGCCCAG ACTCTTTCAT CGATAAAATT TCGGTCTACA GCGCACGCGT TCGCATGGGT
CAGAAGCTCG GTGAAAAGAT TGCGCGCCAG TGGGAAGATC TCGATATTGA TGTTGTGATC
CCTATCCCTG AAACCTCGTG TGATATTGCG TTGGAAATCG CGCGCATTAT TAACAAACCG
TATCGTCAGG GATTCGTGAA GAACCGCTAT GTTGGCCGCA CCTTTATCAT GCCGGGGCAG
CAGGCGCGTA AGAAATCTGT ACGTCGTAAG CTGAATGCTA ACCGTGCCGA GTTCCGTGAT
AAAAACGTGC TGCTGGTGGA TGACTCCATC GTGCGCGGTA CAACGTCGGA ACAGATTGTG
GAAATGGCGC GTGAAGCGGG AGCCAAACGT GTTTATCTGG CCTCTGCGGC ACCGGAAATT
CGTTTCCCTA ACGTGTACGG CATCGACATG CCGAGCGTTA ATGAACTGAT TGCTCATGGT
CGCGAAGTGG ATGAGATCTG TAAGATTATT GGTGCCGATG AACTGATATT CCAGGATCTC
GAAGATCTGA TCGACGCAGC GCGTGAAGAC AACCCAGATA TTGTTCAGTT TGAATGTTCA
GTGTTCAACG GAATTTACGT GACCAAGGAC GTCGATCAAG GCTATCTGGA TTATCTGGAA
GTTCTGCGTA ACGACGACGC CAAGGCGTTG CGTAGTCAGA ATGAAGTCGA AGATTTGGAA
CTGCACAACG AAGGCTAA
|
|---|
| Protein sequence | MCGIVGIAGF TPVNQSIYDA LTVLQHRGQD AAGIVTIDAF NCFRLRKANG LVKDVFEARH
MQRLQGNMGL GHVRYPTAGS SSASEAQPFY VNSPFGITLA HNGNLTNAHE LRKKLFEQER
RHVNTTSDSE ILLNIFAREL DRFQHYPLEA DNIFAAVAAT HQQIRGAYAC VGMIIGHGMV
AFRDPNGIRP LVIGKRDLED GRSEYMVASE SVALDTLGFE FLRDVAPGEA IYITEKGQLF
TRQCAENPKS NPCLFEYVYF ARPDSFIDKI SVYSARVRMG QKLGEKIARQ WEDLDIDVVI
PIPETSCDIA LEIARIINKP YRQGFVKNRY VGRTFIMPGQ QARKKSVRRK LNANRAEFRD
KNVLLVDDSI VRGTTSEQIV EMAREAGAKR VYLASAAPEI RFPNVYGIDM PSVNELIAHG
REVDEICKII GADELIFQDL EDLIDAARED NPDIVQFECS VFNGIYVTKD VDQGYLDYLE
VLRNDDAKAL RSQNEVEDLE LHNEG
|
|---|
| |