| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1451 |
|---|
| Symbol | |
|---|
| ID | 8529842 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1574690 |
|---|
| End bp | 1575232 |
|---|
| Gene Length | 543 bp |
|---|
| Protein Length | 180 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003258857 |
|---|
| Protein GI | 261820751 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.730382 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAATA AATATTCGCT GAATGACGAC GAATTGCAGC TTTTTCGCAC GTCAATCACT
GGCACAAAAA AGTTGCGTCA GGATACCTAT ACCCATAAAC CGCTGCGCAG GAAAATAGGC
GAATTGCCGG CCAAACGGGC ATTGCAGGAA CAGGTTGATG CCAGTTTTTA TTTTTCGGAT
GAATTTCAGC CGCAGTTGGA TGCAGAAGGC CCGACGCGCT ATGTCCGCCC AGGTGCCAGC
CATTATGAAT TGAAGAAACT GCGACGAGGG GATTATTCAC CGGAGCTGTT TCTGGATTTG
CACGGCTTGA CGCAGCTTCA GGCGAAGCAG GAGCTTGGCG CACTGCTGGC AGCCTGTCGT
CGGGAGCACG TTTACTGCGC CTGCGTGATG CACGGGCACG GCAAACATAT CCTTAAGCAA
CAAACGCCGC TTTGGCTGGC ACAGCACCCT GACGTGCTGG CTTTTCATCA GGCTCCAAAA
GAATTTGGCG GGAATGCCGC GCTGCTGGTG TTGGTGGCGC TGGAAGCCCC TTCGCTTGAA
TAA
|
|---|
| Protein sequence | MSNKYSLNDD ELQLFRTSIT GTKKLRQDTY THKPLRRKIG ELPAKRALQE QVDASFYFSD
EFQPQLDAEG PTRYVRPGAS HYELKKLRRG DYSPELFLDL HGLTQLQAKQ ELGALLAACR
REHVYCACVM HGHGKHILKQ QTPLWLAQHP DVLAFHQAPK EFGGNAALLV LVALEAPSLE
|
|---|
| |