| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1425 |
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| Symbol | |
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| ID | 8529815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1545386 |
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| End bp | 1546405 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | |
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| Product | transport system permease protein |
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| Protein accession | YP_003258831 |
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| Protein GI | 261820725 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATC GCACCTACCG GATCACACTG CTGACGGTGG TGGTGTCCAC GTTGTTGATT
GCCGTTTGCT CGCTGGGGAT AGGGCGTTTT AGCTTATCCC CGTGGCGCAT CATCCAGATC
CTTATCGAAC CACTGTCTGA TGGCAATCCT TTACTTGGTG ATATCGAGCG GCAGGTGGTG
TGGAGTGTAC GCTTACCCCG CGTGCTATTG GCCTGGTGTG CAGGTGCGGC ACTGGCGCTG
AGTGGGGCCA CGCTGCAGGG CGTTTTTCGT AATCCGCTGG TGGATCCGCA TATTATCGGC
GTTTCCGCTG GTGCCGCCTT CGGCGGCACG CTGGCAATTT TATTAAGCTG GACGCCGCTG
CTTTTGCTGC TGTCTGCGTT TACGTTCGGC ATGTTGGCGC TCCTGCTGAT TTTCATGATG
GCCGCCGTAT TCGGTAAGCA GAACGTACTG ATCCTGATTC TGGCAGGTGT CATCCTCAGT
GGCTTCTTTG GGGCGCTGGT CAGCTTGATG CAATATCTGG CGGATACCGA AGAGAAGCTA
CCGAGTATTG TGTTCTGGCT GCTGGGTAGT TTTGCCACCG CACACTGGAA CTCGCTGATG
ACGCTGGCGG TGCCATTAGC GCTTGCGGGT GGTCTGCTGC TGCGGCTGCG CTGGCACGTA
AACGTGTTGT CGATGGGAGA GCAGGACGCA CGTGCGCTGG GTGTCGCCGT ACAACCCTTG
CGCTGGCTGA TTTTGAGTCT GTGTGCCGCC ATCGTGGCTG CTCAGGTGGC GGTCAGTGGC
AGCATCGGTT GGATAGGGCT GGTGATCCCC CATATCGCAC GTAGGTTGGT GGGGGCAGAT
CACCGTCGCC TGCTGCCGGT GTCGCTGTGG CTTGGAGGGG GTTTTATGGT GCTGGTAGAC
GATCTGGCGC GCAATCTCAG CGAAGCTGAA ATTCCATTGG GGATTCTGAC GGCGCTACTC
GGTGCACCAC TTTTTGCTGT GCTGCTGTAT AAAACACAGC GACAGGCTGG AGGGCGCTAG
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| Protein sequence | MSYRTYRITL LTVVVSTLLI AVCSLGIGRF SLSPWRIIQI LIEPLSDGNP LLGDIERQVV
WSVRLPRVLL AWCAGAALAL SGATLQGVFR NPLVDPHIIG VSAGAAFGGT LAILLSWTPL
LLLLSAFTFG MLALLLIFMM AAVFGKQNVL ILILAGVILS GFFGALVSLM QYLADTEEKL
PSIVFWLLGS FATAHWNSLM TLAVPLALAG GLLLRLRWHV NVLSMGEQDA RALGVAVQPL
RWLILSLCAA IVAAQVAVSG SIGWIGLVIP HIARRLVGAD HRRLLPVSLW LGGGFMVLVD
DLARNLSEAE IPLGILTALL GAPLFAVLLY KTQRQAGGR
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