| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1419 |
|---|
| Symbol | |
|---|
| ID | 8529809 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1538712 |
|---|
| End bp | 1539698 |
|---|
| Gene Length | 987 bp |
|---|
| Protein Length | 328 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | |
|---|
| Product | General secretion pathway protein K |
|---|
| Protein accession | YP_003258825 |
|---|
| Protein GI | 261820719 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCGC GTCAGCGCGG CGTGGCGCTG TTAGTGGTGC TCTTGATTCT GGCATTAATG
GTAACGATAG CTGCGGTGAT TACGGAACGC ACCGGTAAAG CGTTTTTGCG TACTGAAAAT
CATTTAAGCC GCCAGCAGGC GAAATGGTTT GCGTTAGGGG CGGAAACGCT AAGCGGGCAG
ATATTGCTGC GCGATACCCG AAATATGCCT GGTCGCACGT TTGTCGGGCA AAACTGGTCG
CAGCCAAGCC AGCGTTTTCC CGTGGACGGT GGGGATGTCA TTGGTCAGAT TAGTGATGCG
CGTACCTGCT TTAATCTGAA TGCGATCAAT CAAGGCGTGG ATAACGAAAG TACGCTGGTG
AAGACACCTT ATCCGGCACA GGTTTTCCGT TTTCTATTGA AAAATCTCGG TGAGGAAGCG
GATCGTGCAG AGAAAATCAC CGCCGCAGTG CGTGACTGGA TTGATGCTGA TAACTATCCA
TCGGCGAACG GTGCAGAAGA CGAGGTCTAT GCCACGCTGC CTGTGCCTTA TCGTACCGCT
AACCAAAGAA TGAGTGAAAT CAGCGAATTA CGGGCAGTTT ACGGCATGGA TAGCGATCTC
TATCGCCGGT TATTGCCCTA TGTCTGTGCG CTGCCAGTGG ATGCGATGTC CATTAATATC
AATACACTAA CGGAGTCTGA TGCGCCGCTG TTATCTGCCG TTTTCTTGAA TGAAATGACG
ATGTCGCAGG CAAAAGCGCT GGTGCAGCAA CGTCCTCGGA TGGGGTGGGC AAGTCTGGAG
GTCCTACAGC AAACCGGATT ATTGCCTCCG AATAGTAAAA ATACCGCGCA GCGGGTGCTG
GCAGTGAAAA GTGAATGGTT CTTTGTAAAG CTTCAGGTGC GTGTTGGCGA CACTGATTTT
CACCAACGTA GCTTGCTTCA TCTGAGTGGA CAAAAAGTAG AGGTCGTGCA GCGGCAATAT
GGAGGATATA GGACGGTGAA TCCATGA
|
|---|
| Protein sequence | MKSRQRGVAL LVVLLILALM VTIAAVITER TGKAFLRTEN HLSRQQAKWF ALGAETLSGQ
ILLRDTRNMP GRTFVGQNWS QPSQRFPVDG GDVIGQISDA RTCFNLNAIN QGVDNESTLV
KTPYPAQVFR FLLKNLGEEA DRAEKITAAV RDWIDADNYP SANGAEDEVY ATLPVPYRTA
NQRMSEISEL RAVYGMDSDL YRRLLPYVCA LPVDAMSINI NTLTESDAPL LSAVFLNEMT
MSQAKALVQQ RPRMGWASLE VLQQTGLLPP NSKNTAQRVL AVKSEWFFVK LQVRVGDTDF
HQRSLLHLSG QKVEVVQRQY GGYRTVNP
|
|---|
| |