Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1414 |
Symbol | |
ID | 8529804 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1535338 |
End bp | 1536564 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | general secretion pathway protein F |
Protein accession | YP_003258820 |
Protein GI | 261820714 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACAGT ACCAATATCA AGCGCTGGAT GCGCAGGGGA AAAAATGCCG TGGCAGTCAG GAGGCGGACT CCGCCAGACA GGCGCGCCAG CTATTGCGGG AACGTGGACT GGTGCCGTTG TCGGTTGATG AAAGCCGAGG CGACCAGCAG AAAACCCGTT CTACGGGATT CTCCCTACGC CGAAAAATTC GTATTAGTAC CTCAGATTTA GCGCTGTTGA CGCGCCAGTT AGCCACGCTG GTGGCGGCAT CGCTGCCGCT GGAAGAAGCG CTGGATGCGG TGGCGAAGCA GAGTGAAAAG CCGCATCTGA GCCAGTTGAT GGCGGCGGTA CGCAGCAAGG TGATGGAAGG CCACTCGTTG GCCGATGCCA TGAAGTGTTT TCCCAGTAGC TTTGAACGGC TGTATTGCGC AATGGTCGCA GCAGGCGAGA CGTCCGGTCA CCTTGATGCC GTGTTGAATC GGCTGGCGGA CTACACCGAG CAGCGACAAC AGATGCGTAG CCGCATACAG CAGGCAATGA TCTACCCCTG TGTGTTAACC GTGGTCGCGA TTGCGGTGGT CAGTATTTTG CTGTCCGTCG TGGTGCCGAA GGTCGTCGAG CAATTTATTC ACATGAAGCA GGCGTTGCCA CTTTCTACCC GAGTTTTGAT GGGGATGAGC GATGCCGTGC GCACGTTTGG GCCGTGGTTT CTATTGGCAT TACTGGCTGG ATTTATGGCG CTGCGGGTGA TGCTGCGGCA GGAAAAGCGG CGCGTTAATT TTCATCGACG CCTGCTGCAT TTACCGTTGC TTGGGCGTAT CGCTCGCGGC TTGAATACGG CACGCTACGC GCGGACGCTC AGCATTCTCA ACGCCAGTGC CGTGCCGCTG TTACAGGCGA TGCGCATTAG TGGTGATGTA ATGAGCAATG ATTACGCCCG CCATCGGCTC TCGATGGCAA CGGATGCGGT GCGAGAGGGC GTCAGTCTGC ACAAGGCGCT GGAACAGACG GCGCTCTTTC CCCCGATGAT GCGCCATATG ATTGCCAGCG GTGAGCGCAG CGGCGAGTTG GACAGCATGC TGGAACGGGC AGCGGATAAT CAGGATCGTG AATTCAGTTC GCAGATGACG CTGGCGCTGG GGTTATTTGA ACCTCTGCTG GTGGTCAGCA TGGCGGCAGT GGTGTTGTTT ATCGTATTGG CGATTTTACA ACCGATTCTG CAACTGAATA CGTTAATGAG TTCGTAA
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Protein sequence | MAQYQYQALD AQGKKCRGSQ EADSARQARQ LLRERGLVPL SVDESRGDQQ KTRSTGFSLR RKIRISTSDL ALLTRQLATL VAASLPLEEA LDAVAKQSEK PHLSQLMAAV RSKVMEGHSL ADAMKCFPSS FERLYCAMVA AGETSGHLDA VLNRLADYTE QRQQMRSRIQ QAMIYPCVLT VVAIAVVSIL LSVVVPKVVE QFIHMKQALP LSTRVLMGMS DAVRTFGPWF LLALLAGFMA LRVMLRQEKR RVNFHRRLLH LPLLGRIARG LNTARYARTL SILNASAVPL LQAMRISGDV MSNDYARHRL SMATDAVREG VSLHKALEQT ALFPPMMRHM IASGERSGEL DSMLERAADN QDREFSSQMT LALGLFEPLL VVSMAAVVLF IVLAILQPIL QLNTLMSS
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