| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1412 |
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| Symbol | |
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| ID | 8529802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1531921 |
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| End bp | 1533843 |
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| Gene Length | 1923 bp |
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| Protein Length | 640 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | general secretion pathway protein D |
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| Protein accession | YP_003258818 |
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| Protein GI | 261820712 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGTCAT CGTTAGCGTG GAGCGCTGAG TTCTCCGCCA GCTTCAAAGG TACGGATATT
CAGGAGTTTA TCAATACCGT CAGTAAGAAT CTGAATAAGA CCGTTATTAT CGATCCGTCG
GTCAGCGGAA CGATTACCGT TCGCAGCTAT GACATGATGA ACGAAGAGCA GTATTACCAG
TTTTTCCTTA GCGTGTTGGA TGTCTACGGA TTTACTGTTA TTCCTATGGA TAACAATGTA
TTGAAGATTA TTCGCTCAAA AGATGCGAAA TCGACATCTA TGCCACTGGC GAGCGATGAG
CAGCCGGGTA TCGGCGATGA AGTCGTTACG CGCGTCGTGC CAGTTAACAA TGTAGCGGCA
CGCGATTTGG CACCGCTGCT GCGCCAGTTG AACGACAACG CGGGTGCCGG GAGTGTGGTG
CATTACGAAC CCTCGAACGT GTTGCTGATG ACTGGGCGCG CGGGTGTCAT CAAGCGGCTG
ATGACGATCG TCGAACGGGT TGATCAGACG GGCGATCGGA ATGTCACCAG TATCCCACTG
TCTTACGCGT CCTCGACGGA AGTGGTGAAG ATGGTGAACG AACTGAACAA GATGGATGAG
AAATCTGCCT TGCCGGGGAT GTTGACCGCG AATGTAGTGG CCGACGAACG AACCAACTCA
GTGCTGGTAC GTGGCGAACC GAATTCACGC CAGCGCGTTA TCGATATGGT CAAGCAGCTC
GATCGCCAGC AGGCGGTGCA GGGCAATACT AAAGTCATCT ATCTCAAATA CGCCAAGGCC
GCCGATTTGG TCGAAGTGCT TACGGGCGTA GGTGACAGTA TCCAAACTGA TCAACAGAAT
GCGTTGCCCG CGCTGCGTAA AGACATTTCG ATTAAGGCGC ATGAGCAAAC CAACTCGCTG
ATTGTGAATG CCGCGCCTGA CATTATGCGC GATCTGGAAC AGGTGATTGC ACAGTTGGAT
ATCCGTCGTC CGCAGGTATT AGTCGAAGCG ATCATCGCGG AAGTACAAGA TGCCGATGGG
ATGAATCTGG GCGTGCAGTG GGCTAATAAA AATGCCGGGA CGACGCAATT CACGAATACC
GGGTTACCGA TCACGACCAT GATGGCGGGA GCGGACCAGT TTCGGCGTAA TGGGACGCTT
AGCACGGCAG CGACGAGTGC ACTTGGCAGT TTCAACGGGA TTGCCGCCGG TTTCTATCAG
GGGAACTGGA GCATGCTGAT GACGGCGCTG TCCAGCAACA GTAAGAACGA TATTCTGGCA
ACCCCGAGCA TTGTAACGCT GGACAATATG GAAGCGACGT TTAACGTCGG CCAGGAAGTA
CCTGTATTAG CGGGTTCGCA AACGACATCC GGCGACAACG TTTTCCAAAC GGTGGAACGT
AAAACGGTCG GTATCAAACT GAAGGTGAAA CCCCAAATCA ACGAAGGCGA CTCCGTTCTA
CTGGAAATCG AGCAGGAAGT CTCCAGCGTA GCAGATGCCG CCTCCAGCAG CAGTGCTGAA
CTGGGCGCAA CATTCAATAC GCGCACCGTT AATAACGCAG TGTTGGTCAG CAGTGGCGAA
ACCGTTGTGG TGGGGGGGTT GTTGGATAAA AGTACGCGTG AGTCTGCCAG TAAAGTCCCC
CTATTGGGGG ATATTCCGAT TCTGGGGCAC TTGTTCCGAT CCAACAGTCA GGAAACGTCA
AAGCGTAATC TGATGCTGTT TATCCGTCCT TCCATTATCC GCGATCGTAG CGAATACCAG
AGCGCCTCTG CCAGTAAGTA TCGCTCATTC AACAATGAAG AAGAGAAGCA GCGAAATGTG
AGTAACGGTG AGGGAGGGCT GCTGGATAAC GACTTGCTGC GCTTACCTGA GGGGGGGAAC
GCCCATACGT TCCGTCAGGT TCAGTCCTCT ATCGTGGCAT TTTACCCGGC AGGCGGGAAA
TGA
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| Protein sequence | MASSLAWSAE FSASFKGTDI QEFINTVSKN LNKTVIIDPS VSGTITVRSY DMMNEEQYYQ
FFLSVLDVYG FTVIPMDNNV LKIIRSKDAK STSMPLASDE QPGIGDEVVT RVVPVNNVAA
RDLAPLLRQL NDNAGAGSVV HYEPSNVLLM TGRAGVIKRL MTIVERVDQT GDRNVTSIPL
SYASSTEVVK MVNELNKMDE KSALPGMLTA NVVADERTNS VLVRGEPNSR QRVIDMVKQL
DRQQAVQGNT KVIYLKYAKA ADLVEVLTGV GDSIQTDQQN ALPALRKDIS IKAHEQTNSL
IVNAAPDIMR DLEQVIAQLD IRRPQVLVEA IIAEVQDADG MNLGVQWANK NAGTTQFTNT
GLPITTMMAG ADQFRRNGTL STAATSALGS FNGIAAGFYQ GNWSMLMTAL SSNSKNDILA
TPSIVTLDNM EATFNVGQEV PVLAGSQTTS GDNVFQTVER KTVGIKLKVK PQINEGDSVL
LEIEQEVSSV ADAASSSSAE LGATFNTRTV NNAVLVSSGE TVVVGGLLDK STRESASKVP
LLGDIPILGH LFRSNSQETS KRNLMLFIRP SIIRDRSEYQ SASASKYRSF NNEEEKQRNV
SNGEGGLLDN DLLRLPEGGN AHTFRQVQSS IVAFYPAGGK
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