Gene Pecwa_1410 details

Gene Information

• Locus tag: Pecwa_1410
• ID: 8529800
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1528914
• End bp: 1530893
• Gene Length: 1980 bp
• Protein Length: 659 aa
• Translation table: 11
• GC content: 49%
• Product: Fibronectin type III domain protein
• Protein accession: YP_003258816
• Protein GI: 261820710

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTTCTG TTTTACTTCG TACCCGCCTT ACGTTTTGCG CGACTTTAGT CCTGAGTGGC 
CTGATTGCCG GATGCAACGA TAGCGACGCA ACGCCGGATG TTGGTGTCGA TCGTTCCGCT 
GCGCCACAGA ATGTTAAAGT GCCGACGCTA GCCTATGATG ATACCAGCGT GGTACTAGCC 
TGGGAAAAAC CGACTAAACC TGCCGCAGAC ATTAAAGATT ATCGTGTCTA TATGAATGGA 
ACCTTGTTGG GCGGAACCAT TGATAACCAG AACGCGCATT CGCCAGCTAA GCCATATATC 
GATAATTTCT ATAACTCGAT CGATACCACC AACTGGCACG TCCGCGTCAG TTTCCATAAT 
TTCAAGGTGG CTAACCTGTC GCCTGAAACT GAGTACCGTT TCACGGTGCG CGCGCTTTAT 
GACGATGGCA AAGAATCTGT TGATAGTGAA GCGGTTGTGC AGAAAACGAC TGCTACGCCA 
GCCTCACTGA ACGTGACTAA CTACGGTGCG AAAGGGGACG GGATAGCAAA CGATACGCTG 
GCGATTCAGA AAGCGATTGA TGACTGTACG CCAGCCGCGT ATCCGAAAGG CTGTAAAGTC 
GTGGTTGAAG GTGGCACGTT TAAAACCGGA GCGCTGTTCC TGCATAGCGA TATGACGTTT 
GAAGTTGCGA AAGGTGCTAC GTTGCTAGGG TCGGCAAACG GTGACGATTA CCCGCTCGCG 
CGTGGCTACT ATCTCTACCC GTACAGTGCA CCTAAATTGC CTAAGCGCCC ACCCTCACTG 
ATTAACGTAT TGGAAGCGGA CGATCAGGGT AGCAGTCATG CTGGCACCTT TAAAAATATT 
CGTATCGTCG GGCAGGGCAC GATTGATGGT AATGGCTGGA TGCGTGGCAT TAAAGCCAGC 
GATAAAAACA TTACTGAAAT TGATGAATTA AAGAATGAGT TGCCGCTCTA CCGTGCGAGC 
AAAGCGACTA ATGTTGGCAG TGACGGTATT CTGGCAAAAG ACCAAACGGC AAAAGCCGTT 
GCTGAAGGAA TGCTACTGGA TGAGGCGTAT AAAAACCGCC GCTCCAGCCT GATGACCTTG 
CGCGGTGTGA GCAATATGTA TCTGGAAGGG CTGACAATTC TGAATCCTGC ATACCACGGT 
GTGATGGTAC TGGAATCCGA AAATGTGGCG ATGAATGCGC TGGTACACAC GACGTATGAT 
GCTAATAATG CGGATGGTAT TGAATTCGGA AATAGCCAGA ATGTCATGGT ATTCAATAAC 
TTTTTTGATA CAGGAGATGA CAGCGTAAAC TTTGCCGCGG GGTATGGTGC CGAAGTGGTG 
ACGCTGGGGC AAAAAGCGCA GAGCGGCGCT TGGATCTTCA ATAACTACTT CCGTCGCGGG 
CATGGTGCGG TGGTCACGGG TAGCCATACT GGTGCCTGGA TCGAGAAAAT TGTTGCTGAA 
GATAACGTAA TGAATAAGAC GGATGTTGGC TTGCGCATGA AGAGTCGTCC CTATTATGGT 
GGCGGCTCGC GTGACGTGGT ATTCCGTAAT AACGCGATGC GTGATATTGT CAAGGAACCG 
TTCGTGTTCA CTATCAAATA TAAAGCGGAC GTGAACGATA CCCAGCCAGC GGCAGAACCC 
GCACAGTTCC GCGATGTGAC CGTTTCCAAC GTCACGGTTG ATGGTTCAGC GAAGAAAAAC 
AGCATCATGG TCGATGGGAT GACCATCGCT GAGATGGCTG ATGCGTATAA GTTCTCTTTT 
GGGCGTGATG CTTATCACCA AGGGCTGCAT TTTGAGAATG TAAAATTCAA AAATGTAAAA 
GCCACTGACA TCACGTTCCT GAAGAACAGT GAATTTAAGA ATGTCGTTTT TGAGAATGTA 
CCGGGAGCCT GGAATTTCGG CCATATTGAA AATATCGGGC TCAAAGACCG TGTAAATAAT 
GATGCCGCGC TGACGACCCG CGATGATGAG ACCATCAGCC GGGAAGCCGC AACGGAATAA 

 

Protein sequence

MTSVLLRTRL TFCATLVLSG LIAGCNDSDA TPDVGVDRSA APQNVKVPTL AYDDTSVVLA 
WEKPTKPAAD IKDYRVYMNG TLLGGTIDNQ NAHSPAKPYI DNFYNSIDTT NWHVRVSFHN 
FKVANLSPET EYRFTVRALY DDGKESVDSE AVVQKTTATP ASLNVTNYGA KGDGIANDTL 
AIQKAIDDCT PAAYPKGCKV VVEGGTFKTG ALFLHSDMTF EVAKGATLLG SANGDDYPLA 
RGYYLYPYSA PKLPKRPPSL INVLEADDQG SSHAGTFKNI RIVGQGTIDG NGWMRGIKAS 
DKNITEIDEL KNELPLYRAS KATNVGSDGI LAKDQTAKAV AEGMLLDEAY KNRRSSLMTL 
RGVSNMYLEG LTILNPAYHG VMVLESENVA MNALVHTTYD ANNADGIEFG NSQNVMVFNN 
FFDTGDDSVN FAAGYGAEVV TLGQKAQSGA WIFNNYFRRG HGAVVTGSHT GAWIEKIVAE 
DNVMNKTDVG LRMKSRPYYG GGSRDVVFRN NAMRDIVKEP FVFTIKYKAD VNDTQPAAEP 
AQFRDVTVSN VTVDGSAKKN SIMVDGMTIA EMADAYKFSF GRDAYHQGLH FENVKFKNVK 
ATDITFLKNS EFKNVVFENV PGAWNFGHIE NIGLKDRVNN DAALTTRDDE TISREAATE