Gene Pecwa_1409 details

Gene Information

• Locus tag: Pecwa_1409
• ID: 8529799
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1527598
• End bp: 1528161
• Gene Length: 564 bp
• Protein Length: 187 aa
• Translation table: 11
• GC content: 55%
• Product: general secretion pathway protein
• Protein accession: YP_003258815
• Protein GI: 261820709

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATAACG CACCGGACGC ACCGATACCC CCACAGCCAG CGCTACTTGC CAGATACCCG 
ATGCCCGGTT ATCTGATGGT TGTTTATGCT CTGCTTTTTA TCGCGCTAGG CTGGTTCAGC 
CACCAGCGCT GGGGGAGTCC AACGACTTCC ACACCGACCA CTCTGGCCGC TACCTTGCCT 
GCGGTTGAGG GACAAGCACC GACAACATCC GCGGCCACAT CTCATCAAGG GGAGGTCCAT 
GCTGATACAC CTGCGCCCCC AGAGAAAAAG ACCACGCTGC CGTTACCTGC TATCAGCAAT 
GGTGAAATTC CGCCGCTGAC CTACAGCGCA CATGTTTATA CGTCCGATGA AACCAAGCGC 
AGTATCACAC TCAACGGTCT GCAATTCCGC GAAGGCGATT CACCAGTGGA AGGGCTAACC 
ATAGAACAAA TCCAGCAAGA TATGACCATT TTTAGCGTAG AAGGCGAAGT GTTTATTCTG 
GAGGCACTGG AGGACTGGCC GGGCGGAAAA TTCAACGAGA ATGAACGTTC CGCCGACAAT 
GAACGTGGAA GTGCTGCGTC TTAG 

 

Protein sequence

MDNAPDAPIP PQPALLARYP MPGYLMVVYA LLFIALGWFS HQRWGSPTTS TPTTLAATLP 
AVEGQAPTTS AATSHQGEVH ADTPAPPEKK TTLPLPAISN GEIPPLTYSA HVYTSDETKR 
SITLNGLQFR EGDSPVEGLT IEQIQQDMTI FSVEGEVFIL EALEDWPGGK FNENERSADN 
ERGSAAS