| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1404 |
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| Symbol | |
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| ID | 8529794 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1520963 |
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| End bp | 1523416 |
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| Gene Length | 2454 bp |
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| Protein Length | 817 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | MscS Mechanosensitive ion channel |
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| Protein accession | YP_003258810 |
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| Protein GI | 261820704 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATTC TTTCATCCGC ATTTTTACGC ATTTGTCTAT TGACGGTGTT AATGCTGCCT
GCTGGATATG CCGCGGCGGC GAATGCGGGT TCTGACCCAG ATCCACAGCC CGCTCAGACT
GATGCACCAG TAAAAATTAA TGTTGATGCC GAGTTGATCA AGCTGCAAAA ACAGTTGGAT
AGCATCAAGC AGCAAGTCTC AGGCACCAAT AACGACAGCA AATTTGGTGC GTTGAATGAC
ACGACACAGG AACTGGTGAA TAGCGCCAGC GAGCTTTCTA ATGCGGTTGC GCCGCTACGT
GCTCAAATTC AGGCTCAGTT GGATGTATTA GGGCCTGCAC CAGAGCCTGG TTCCAGTCTT
AATGAAACCA GTGAAGTGAC GCGTAAGCGC AATAGCCTGA ATGCGCAAAA AGCAAAAATG
GATGCGCAGA TCGAACAAAT TCAGGCTTTA CGCACCAGTG CGGCTAATCT GTCGGCGCAA
ATCGTTACTC TGCGCCGTAG CGCACTGAAA ACACAGTTGG CATTGAACTC CGGCAGCATT
TTGGGCGGGC GTTTCTGGGC TCCGCTTGCG GCACCGCAGG CCGAGGATGT TCGCCGGCTG
AGTACTTTTC AAGATCAATT CAGCGATGCT TTTATGGTGG CTTGGGAACC GGACTGGCGT
TACGGCTCTG CGTTCCTGAT TCTGATTGCA ATGGCGATGA GTTCGGCAGG GCGACGGTAT
CTGGAAAAGT ATCTGGCTTG GGCGGGGATC CACTGGTTAC CGGAAGGGCG CTTGCGGAGG
AGTTTCTTGG CCACGGCATC GGTTATTTCA ACCGTGGTAA CGATCGGCAT TGCGGCAAAT
TTAATCGATT TTACGTTCAC GCGTCATGGC GAGGCGACAG AACGCGTAGT GTCGTTCCTT
GATGCGCTGG TGAGACAGGC AATCTTCTGT TCGATGATTG CTGGGCTGGG GCGAGCATTT
CTGTCAAATA AACGCCCTTC GTGGCGTTTA CCCGCGATTG CGAATCCAGT CGCAAAGGCC
ATGAAACCGT TTCCTGTGGT TGCCGCTGGC ATTATTCTGA TCTTCGGTTT TATTGAACAG
GTGACGGCGA CAGTAGGGAC ATCGGTTGCG GCAACCATTA TGGTGAACGG CTTATCTGCA
CTGTTCTTAG CCTTCACCGC AGGCACGATC ACGCTGAAAA GCGATCAAAT TCGTCGGCAG
ATGGTGCATT CAGGGGAACA ACCGGAAGCG CGTTCGACGC TATCTGGCGT TATCCACCTT
GCGGTATTGG CGACGTCATT CTCAATACTG GTGTCGTTGG TCATCGGTTA TATCTCACTG
GCTCGTTTCC TGGCGTTCGA GCTAGTGTGG ATTGGCATGG TGTTCTCCTG CCTGTATTTG
TTTTCAACGT TTATTACCGA TATCTGCGAA AGTCTCTTCT CCCCCCATAA TGCCAGTGGC
AAGCGGATGA AAAATTCGCT CAATCTGGAC GATCGGCATC TGGCTCAAGC TACATTGCTT
CTGTCGGCTA GCGGTAAAGT CTTTTTAATT TTGATGGCGG CTGTTGCTTT ACTAAACGGT
ACGTTTGGCA CGACTACGCC ACTGGAATTG GTGCAAAAAG CCGCTGAGAT TTGGGGAGGG
AAAGGGCTGG AAACATTGAG CATCGTGCCT GCTCATCTGG TTAACGCAGT GCTCTTTTTG
GTGGTAGGAG TTTATGTTTT ACGCTCTTCA AAACGCTGGC TGGAGGACGA GTTTCTTCCT
AAAACGACGT TAGAACGTGG GATCCGTGCA TCGCTGGTGA CGCTGTTTAG CAACATCGGC
TATATCCTGA TTATTCTGCT GACGTTGGCG ACATTGGGGA TTCAATGGAA CAAGCTAGCG
TGGATTGTCA GTGCGTTGTC GGTGGGTATC GGTTTTGGCT TACAGGAGAT AGTGAAGAAC
TTTATCTCTG GCCTGATTCT GTTGACGGAA CGCCCGGTGA AAGTAGGGGA CTCGGTCAGT
ATCAGCGGAG TCGAAGGAGA TATCCGTCGG ATTAACGTGC GTGCGACGGA AATTCAATTG
GGCGACCGTT CGACGGTAAT TGTGCCGAAC TCGCAATTCA TCTCACAGAA TGTGCGCAAT
ATTACCATGG GGAACCCCTT TGGGGTTGCG ACGCTGGCGC TGACGTTCCC GTTGGATATC
GATCCTGAAG AAGTCCGATC CCTGTTGCTG GATGCTTATA TCAACCACGA TGCGATTTTG
GAATCACCAG CACCGTCAGT GAAGTTCAGT CAGTTGACTC CTACGGGTAT GGTGCTGAGC
GTAACGGGCT ATGTCAGCAG CCCGAGAATG GTCTCGGAAG CGAAGAGCGA CCTGTTGTTT
GAGATCATCA AGCGGTTACG GGCATCTAAT ATTCCGCTGG CCGTACCGCA GAAGATGGTG
CTGGAAAACT CGGGGGTGGC GCTGACTGAC GGCACTTCGG GCGAGGATAA ATAA
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| Protein sequence | MNILSSAFLR ICLLTVLMLP AGYAAAANAG SDPDPQPAQT DAPVKINVDA ELIKLQKQLD
SIKQQVSGTN NDSKFGALND TTQELVNSAS ELSNAVAPLR AQIQAQLDVL GPAPEPGSSL
NETSEVTRKR NSLNAQKAKM DAQIEQIQAL RTSAANLSAQ IVTLRRSALK TQLALNSGSI
LGGRFWAPLA APQAEDVRRL STFQDQFSDA FMVAWEPDWR YGSAFLILIA MAMSSAGRRY
LEKYLAWAGI HWLPEGRLRR SFLATASVIS TVVTIGIAAN LIDFTFTRHG EATERVVSFL
DALVRQAIFC SMIAGLGRAF LSNKRPSWRL PAIANPVAKA MKPFPVVAAG IILIFGFIEQ
VTATVGTSVA ATIMVNGLSA LFLAFTAGTI TLKSDQIRRQ MVHSGEQPEA RSTLSGVIHL
AVLATSFSIL VSLVIGYISL ARFLAFELVW IGMVFSCLYL FSTFITDICE SLFSPHNASG
KRMKNSLNLD DRHLAQATLL LSASGKVFLI LMAAVALLNG TFGTTTPLEL VQKAAEIWGG
KGLETLSIVP AHLVNAVLFL VVGVYVLRSS KRWLEDEFLP KTTLERGIRA SLVTLFSNIG
YILIILLTLA TLGIQWNKLA WIVSALSVGI GFGLQEIVKN FISGLILLTE RPVKVGDSVS
ISGVEGDIRR INVRATEIQL GDRSTVIVPN SQFISQNVRN ITMGNPFGVA TLALTFPLDI
DPEEVRSLLL DAYINHDAIL ESPAPSVKFS QLTPTGMVLS VTGYVSSPRM VSEAKSDLLF
EIIKRLRASN IPLAVPQKMV LENSGVALTD GTSGEDK
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