Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1380 |
Symbol | |
ID | 8529769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1502142 |
End bp | 1502975 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003258787 |
Protein GI | 261820681 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.966548 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAAATTG AACCCGAGGT TTTGACCGAA CACACCGAGC TGATTTGCTC GACCAATATC GAACGTATCG TTACCGGACG TGATACCGCG CTGCAACAGA TAGAACAGCT CCTCAACCAG CTACAGGTTA TTTCAACACT CACAGCGACT ATTGGTGGCG GCACCGCTGA AGACTGGGCG CTAAAGCAGG GGCATCGCTA CGACTGCTGG CTAACAGAAG CACCCAACAA GGCGATGCCC GCCATCACCC GCACGTTGGA TCGCAATATC TGGCGCGACC TGATGCTGAA GTCCGGCATG TTGTCGCTGA TGGATGCCGA AGCGCGTAGC CAGTGGCATA AACATCTGGA TGAAGGTGAG CTACCAGCCA TCAGTGAAAC CAATATCCTC AGTACATTTG AGCAACTTCA CCAGAGTAAG CTGGAGGTAT TCGAGCGCGG GATAATCAAT GTATTCAAAG GGCTATCGTG GGATTACAAA ACTAATCACC CTTGTTACTT CGGCAAGAAA ATCATCATCA GCAATCTGGT GACCTACAAC CGTTGGGGCT TTGGCCTGAA CTGGGGTTGG CGACGCGATC AACTGGCTGA TCTGGAACGT ATGCTGTATC TGCTGGATGG TAAACCTATT CCTGATAATC GGGGGGATCT TACCATCCGA CTGATGGACC ACATCCGCGA TAATCCCCAT CAGCAGGAAT ACGAAGATGA GTTCTTTAGT GTGCGTTACT TTCAGAAAGG TACCGGGCAT CTCACCTTTA AACGCCCTGA CTTGATCGAT CAGATGAACG ATATTATCGC CAAACATTAT CCGGGGATGT TGGCGGCCAG GTAA
|
Protein sequence | MQIEPEVLTE HTELICSTNI ERIVTGRDTA LQQIEQLLNQ LQVISTLTAT IGGGTAEDWA LKQGHRYDCW LTEAPNKAMP AITRTLDRNI WRDLMLKSGM LSLMDAEARS QWHKHLDEGE LPAISETNIL STFEQLHQSK LEVFERGIIN VFKGLSWDYK TNHPCYFGKK IIISNLVTYN RWGFGLNWGW RRDQLADLER MLYLLDGKPI PDNRGDLTIR LMDHIRDNPH QQEYEDEFFS VRYFQKGTGH LTFKRPDLID QMNDIIAKHY PGMLAAR
|
| |