| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1322 |
|---|
| Symbol | |
|---|
| ID | 8529711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1442158 |
|---|
| End bp | 1443240 |
|---|
| Gene Length | 1083 bp |
|---|
| Protein Length | 360 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003258734 |
|---|
| Protein GI | 261820628 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCGA TCCAGTTGGA TAAAGTTAGT AAGCATTTTG GCAAAACGAT TACGCTTCAC
GATGTGAATC TGACGATTGC AGATGGAGAG TTCGCTGTTT TTGTTGGGCC GTCTGGCTGC
GGTAAGTCGA CGTTGCTGAG AATGATTGCC GGACTGGAAG ATGTCACAGG CGGTGAAATC
ATGATTGATG ATGCGGTAGT GAATGATGTC GCCCCCGCGC ATCGTGGTGT GGCGATGGTG
TTCCAATCCT ATGCGCTATA CCCGCACATG ACCGTCGCCG AGAATATGGG CTATGGCCTG
CGTGTTAATG GCGTCCCGAA AGACCAGATT AAGCACCAGA TCGAAATGGT GGCGAAGACG
CTGCAACTGT CTCATTTGCT GGAACGCAAA CCGAAAGAGC TATCAGGCGG CCAGCGTCAG
CGTGTGGCGA TAGGGCGCGC GATTGTGCGT AACCCGAAAG TATTCCTGTT TGATGAACCG
CTGTCGAACC TTGATGCAGA GCTGCGAGTG GATATGCGGT TGCACATAGC CAAGCTACAT
CAGGAATTGA AAACGACGAT GGTCTACGTA ACGCACGATC AGGTCGAAGC CATGACGCTG
GCTGACAAAA TCGTGGTGAT GAATTACGGT AAAGTTGAGC AGGTTGGATC ACCAATGGAG
CTTTATTATC ATCCGGTTAA CCAGTTTGTA GCGGGGTTTA TTGGCTCGCC AAAAATGAAC
TTCCTACCTG CACAGGTTAT CGACTGGACG CCGGATAGTC TGACGGTAAA TGTCGCCGAT
CAGCTACAGC TTGAGCTGCC GATCCGTACC AGTGAGTTGG GCACTGGCAG TACGGTAACG
CTGGGGCTAC GGCCAGAACA CGTTTCACCG GAAGGTGAGG GGATTCGCCT GTCATTCGGT
TGTGAAGTCG TCGAACGTTT AGGCAATAGC ACTTATCTGT TCGGTCAATG CTGCGGGATT
GATAATTTCA AACTTCTGCT GGCGGGCGAC AGCGCTTTCA AGCCCTATGA ACACATTGAG
GTTTTCTTCT CCCCCACTAA CTGTCTGGTG TTCAACGCCG ATGGCCTGCG TATCAGCGCT
TAG
|
|---|
| Protein sequence | MASIQLDKVS KHFGKTITLH DVNLTIADGE FAVFVGPSGC GKSTLLRMIA GLEDVTGGEI
MIDDAVVNDV APAHRGVAMV FQSYALYPHM TVAENMGYGL RVNGVPKDQI KHQIEMVAKT
LQLSHLLERK PKELSGGQRQ RVAIGRAIVR NPKVFLFDEP LSNLDAELRV DMRLHIAKLH
QELKTTMVYV THDQVEAMTL ADKIVVMNYG KVEQVGSPME LYYHPVNQFV AGFIGSPKMN
FLPAQVIDWT PDSLTVNVAD QLQLELPIRT SELGTGSTVT LGLRPEHVSP EGEGIRLSFG
CEVVERLGNS TYLFGQCCGI DNFKLLLAGD SAFKPYEHIE VFFSPTNCLV FNADGLRISA
|
|---|
| |