| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1318 |
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| Symbol | |
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| ID | 8529707 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1436914 |
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| End bp | 1438131 |
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| Gene Length | 1218 bp |
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| Protein Length | 405 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | Arabinogalactan endo-1,4-beta-galactosidase |
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| Protein accession | YP_003258730 |
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| Protein GI | 261820624 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00527191 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATGA AAAAACGCGT ACTGATGGCC GCCATGCTCG CAACTGGCCT GCTGACTGTC
TCCCTGCCGC AAACCCTGTA TGCAGCAGAA AATGTGACGA TCAACAAATT GACGAACGTC
CCTGCCGACT TCATTAAAGG CGCGGACATT TCCATGCTGA ACGAGGTGGA AAAGCACGGC
GGAAAATTTT ATGACGAGCA TGGCAAGCAG AAAGATGCCA TGCTGATCCT GAAAGAAAAC
GGCATTAACT ATATCCGTCT GCGCATCTGG AACGATCCGA AAGATACGGC GGGCAATGGC
TACGGCGGCG GTAACAACGA TCTGGCGACC ACGTTAGCGC TGGCTAAACG CGCCAAAGCG
AACGGTATGA AAGTGCTACT GGATTTCCAC TACAGCGATT TCTGGACCGA TCCAGCCCAC
CAAAACAAGC CCAAAGCCTG GTCTGGCCTA AACGTAGCAC AGCTCACTAC GGCCGTGCAT
GACTACACCA AAGCCACCAT TAGCGAATTC CAGAAAGCGG GCGTCATGCC GGATATGGTG
CAGATCGGTA ACGAACTGAA CGGCGGGATG CTGTGGCCGG AAGGAAAAAG CTGGGGTCAA
GGTGGCGGCG AATTCGATCG CCTCGCTGCA TTACTGAAAT CCGGTATTCA GGGCGTGAAG
GACGTACAAG GCGCGAATAA CGTCAAAATC ATGCTGCATC TGGCTGAAGG CACCAAAAAC
GACACCTTTA TCTGGTGGTT TGATGAAATC GTCAAACGCA ATGTCCCGTT TGATGTCATC
GGTGCCTCAT TCTACACCTA CTGGAACGGC CCCATCAGCG CGTTGCAGTA CAACATGAAC
GACGTCACCA AGCGCTACAA TAAAGACATC ATCGTGGTTG AAGCCGCCTA TGCCTATACG
CTGGAAAACT GCGATAACGC CGAAAACAGC TTCCAGCAAA AAGAGCTGGA TGCAGGCGGC
TATCCGGCTT CCGTTCAGGG GCAGGCCAAC TACCTGCACG ATCTGATGCA AAGCGTCATC
AACGTTCCCA ACCAACGCGG CAAAGGCGTC TTCTATTGGG AGCCAATCTG GTTGCCTACT
CCCGGTGCAA CCTGGGCCAC GAAAGCGGGC ATGAAGTACA ACAAGGACGA ATGGAAGGAA
GGCAACGCGC GGGAAAATCA GGCGCTGTTC GACTGCAAAG GCAACGTCCT GCCTTCCATC
AAAGCGTTTA AGTCGTAA
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| Protein sequence | MKMKKRVLMA AMLATGLLTV SLPQTLYAAE NVTINKLTNV PADFIKGADI SMLNEVEKHG
GKFYDEHGKQ KDAMLILKEN GINYIRLRIW NDPKDTAGNG YGGGNNDLAT TLALAKRAKA
NGMKVLLDFH YSDFWTDPAH QNKPKAWSGL NVAQLTTAVH DYTKATISEF QKAGVMPDMV
QIGNELNGGM LWPEGKSWGQ GGGEFDRLAA LLKSGIQGVK DVQGANNVKI MLHLAEGTKN
DTFIWWFDEI VKRNVPFDVI GASFYTYWNG PISALQYNMN DVTKRYNKDI IVVEAAYAYT
LENCDNAENS FQQKELDAGG YPASVQGQAN YLHDLMQSVI NVPNQRGKGV FYWEPIWLPT
PGATWATKAG MKYNKDEWKE GNARENQALF DCKGNVLPSI KAFKS
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