Gene Pecwa_1317 details

Gene Information

• Locus tag: Pecwa_1317
• ID: 8529706
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1434813
• End bp: 1436873
• Gene Length: 2061 bp
• Protein Length: 686 aa
• Translation table: 11
• GC content: 55%
• Product: Beta-galactosidase
• Protein accession: YP_003258729
• Protein GI: 261820623

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00129022
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTAAAT TCCCCCCATT AAGCAGCAAG GTGCCTGTTC TGCTGCACGG TGCAGACTAT 
AATCCAGACC AATGGCTGGA CAACCCAGAG GTATTGGAAA AAGACATCGA GATGATGAAG 
CAGACCCAGT GCAACGTCAT GTCCGTGGGC ATTTTTAGCT GGTCCGGGAT TGAGCCGGAA 
GAAGGTCGCT ACGAATTTGG CTGGCTGGAT GGCATCCTCG ACATGCTGCA TGCCAATGGG 
ATCTTCGTTT TTCTGGCAAC GCCCAGCGGT GCTCGTCCGG CCTGGCTCTC GCAGAAATAC 
CCGGACGTGC TACGCGTGGG TAGCAATCGC GTGCGGGCGC TGCACGGCGG TCGTCACAAC 
CACTGCCTGA GTTCGCCGAA TTATCGCGAA AAAGTAAAAC AAATGAACAC CCAGTTGGCA 
AAACGCTACT CGCACCATCC TGCGGTGATC GGCTGGCATA TTTCCAACGA ATACAGCGGC 
GAGTGCCATT GTGATACCTG TCGCAGCACC TTCCAAAGCT GGTTGAAAGC CCGCTACGGC 
ACGTTAGAGG CGCTGAATAA AGCGTGGTGG AGCACCTTCT GGAGCCACAC CTACACCGAC 
TGGTCGCAGT TAGAACCACC GTCACCCATC GGTGAAGTCT CCATTCACGG CCTGAATCTG 
GACTGGAAAC GTTTTAACAC CTCACAGGTC AGTGATTTTT GTGCCGCCGA AATTGCGCCG 
CTAAAAGCCG AAAATCCGTC ACTGCCAACC ACGACGAACT TCATGGAATA TTTCTATGAT 
TACGACTACT GGCAGTTGGC GAAGGTGATC GATTTCATCT CCTGGGACAG CTACCCGCTG 
TGGCATAACG CGGAAGATGA CTGCACGCTG GGTGCTTACA CCGCGATGTA TCACGACCTG 
ATGCGCACGC TGAAAGGTGG CAAGCCCTTC TACCTGATGG AATCAACGCC GAGCCTGACC 
AACTGGCAGC CGATCAGCAA ACTGAAAAAG CCGGGTATGC ATATCCTGTC TTCGCTTCAG 
GCCGTCGCGC ACGGGTCAGA CTCCGTGCAG TATTTCCAGT GGCGTAAGAG CCGCGGTTCC 
GTCGAGAAAT TCCACGGTGC CGTCGTCGAT CATGTCGGGC ATATCGACAC CCGTGTCGGG 
CGCGAAGTAC AGGAGTTGGG TGACATACTC AATAAACTCG CTCCTGTCGC AGGCAGCAGG 
GTCGATGCGA AAGTCGCCAT CATTTTCGAC TGGGAAAGCC GCTGGGCGAT GGATAATGCT 
CAAGGGCCGC GCAATGCGGG GCTGTTCTAT GAAAAAACCG TCACCGATCA CTATCGGACG 
TTCTGGGAAC AGGGCGTGGC GGTGGACATC ATTAACGCCG ATGTCGACCT CAGCGGTTAT 
CAGGTTGTGA TTGCACCGAT GCTCTACATG GTGCGCGATG GTTTTGCCGA ACGCGTCGAT 
GCTTTCGTCA AACAAGGTGG CCGCTTCGTC ACTACCTACT GGTCTGGTGT CGTTAACGAC 
ACCGATCTGT GCTACCAAAA CGGTTTCCCC GGTCCGCTGC GCCCTATCAT GGGAATTTGG 
GCGGAAGAAA TCGACGGACT GTACGATCAT GAAAGCAACA GTATCAGCGG TCTGACAGGG 
AATGAACAAC GTCTGGCCGG CCCGTATCAG GTCACTCACC TGTGCGAACT GATTCATCTG 
GAAGGCGCAC GGGCACTAGC GACCTATGAC AGCGATTTCT ATGCCGGACG CCCAGCCGTG 
ACGGTCAATG ATTACGGCAA AGGACAGGCG TACTACATCG CATCGCGCAA CGATCTCGCC 
TTCCAGCGGG ATTTCTTCAC CACGCTGATA CAAACGCTGG ATCTACCGCG CGCGCTGCCA 
ATCGATCTGC CTTACGGCAT TGTCGCTCAT CGTCGTGATG ACGGGGAAAG CGAGTTTATC 
TTCGTACAGA ACTACACGGC AACGCCGCAG CACATTACGC TGCCTGCCGT TTACGAGGAA 
ATGACGACAG GCAGCACGCT TTCAGGGGCG CTCGACCTGT CAGGCTATGG CTGCCGGATC 
CTACGCCGCG CATTACAGTA A 

 

Protein sequence

MFKFPPLSSK VPVLLHGADY NPDQWLDNPE VLEKDIEMMK QTQCNVMSVG IFSWSGIEPE 
EGRYEFGWLD GILDMLHANG IFVFLATPSG ARPAWLSQKY PDVLRVGSNR VRALHGGRHN 
HCLSSPNYRE KVKQMNTQLA KRYSHHPAVI GWHISNEYSG ECHCDTCRST FQSWLKARYG 
TLEALNKAWW STFWSHTYTD WSQLEPPSPI GEVSIHGLNL DWKRFNTSQV SDFCAAEIAP 
LKAENPSLPT TTNFMEYFYD YDYWQLAKVI DFISWDSYPL WHNAEDDCTL GAYTAMYHDL 
MRTLKGGKPF YLMESTPSLT NWQPISKLKK PGMHILSSLQ AVAHGSDSVQ YFQWRKSRGS 
VEKFHGAVVD HVGHIDTRVG REVQELGDIL NKLAPVAGSR VDAKVAIIFD WESRWAMDNA 
QGPRNAGLFY EKTVTDHYRT FWEQGVAVDI INADVDLSGY QVVIAPMLYM VRDGFAERVD 
AFVKQGGRFV TTYWSGVVND TDLCYQNGFP GPLRPIMGIW AEEIDGLYDH ESNSISGLTG 
NEQRLAGPYQ VTHLCELIHL EGARALATYD SDFYAGRPAV TVNDYGKGQA YYIASRNDLA 
FQRDFFTTLI QTLDLPRALP IDLPYGIVAH RRDDGESEFI FVQNYTATPQ HITLPAVYEE 
MTTGSTLSGA LDLSGYGCRI LRRALQ