| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1312 |
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| Symbol | |
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| ID | 8529701 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1428337 |
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| End bp | 1429569 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | multidrug efflux system subunit MdtA |
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| Protein accession | YP_003258725 |
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| Protein GI | 261820619 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.164615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGCTA AACGTATCCG AGGCCTGCTG GTACTTGCCG CTGTTATCGC TATTGCCGTA
CTGATCTGGC GCCATTTTAC CCAGACGTCG CCTGCCGCTC CCGGCACGAG TGAACAGCAC
GCCGCCCGTA CGTCACATTC GGGCAGTAGC AGTGGTGGTG GGCGCAGGGC GGCCATGCGC
ACGCTGGCTC CCGTACAGGC GGCGCTGACG CAATCCGCCT CCGTACCTTA TTATCTGTCC
GGTTTAGGCA CCGTGACCGC AGCCAATACC GTGACGCTAC GCAGCCGGGT GAACGGGCAA
CTGATGGCAC TGCACTTTCA GGAAGGGCAG CAGGTTAAGG TTGGTGACCT GCTGGCAGAA
ATCGATCCCC GCCCTTTTCA GGTTGAACTG ACGCAGGCAC AGGGGCAGTT GGCAAAAGAT
CGGGCCGTGC TAGCTAACGC TCAGCAGGAT TTAGCACGTT ATCAGCAATT GGTGAAAACC
AACCTGATCT CCCGTCAGGA ACTGGATACG CAGATCGCCG CCGTGCGACA GGCAGAAGGC
GCATTAAAAG CCGATGACGG TGCCGTAGCC AGCGCACAGC TTCAGTTGGA TTACAGCAAA
ATTACCGCCC CTATCAGCGG CCGGATCGGT TTAAAACAGG TCGATGTGGG GAATTACATC
ACCAGCGGCG ACACCAATGG CATTGTCGTG ATTACGCAGA CGTACCCTAT CGATGTCGTC
TTTACCGTAC CGGAAGCGGA AATCTCCACC ATTATTAGCG CGCAGAAATC AGGTCAGCCG
CCGGTGGTAG AAGCCTGGGA TCGCACCAAC CAGAAGAAAC TCTCGCAGGG TAGCCTGCTC
AGTATGGATA ACCAGATCGA CACCACTACC GGTACGATCA AGCTCAAGGC GCGTTTTGAC
AATCTGGATG ATGCCCTGTT CCCGAATCAG TTTGTGAATA TCCGCATGAA GGTCGATACG
CTGCAAAACG CCGTCGTCGC ACCGTCTGCC GCCGTACAAA TGGGCAATGA AGGCCGCTTC
GTCTGGATTT TGAATGATAA GAACGAGGTT AGTAAGCGTC AGGTCACGAC CAGTATTCAG
TACGGCCAGT TGGTCGTGGT CACTGCCGGA CTGGATGCCG ATGTTCAGGT TGTCACTGAC
GGCATCGACC GTCTGACCGA AGGAACCAAA GTGGAAGTCG TTCCCTCTAC GCTGACGGAG
AAAACGCCTG CAATCACTGG GGAGAAATCC TGA
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| Protein sequence | MNAKRIRGLL VLAAVIAIAV LIWRHFTQTS PAAPGTSEQH AARTSHSGSS SGGGRRAAMR
TLAPVQAALT QSASVPYYLS GLGTVTAANT VTLRSRVNGQ LMALHFQEGQ QVKVGDLLAE
IDPRPFQVEL TQAQGQLAKD RAVLANAQQD LARYQQLVKT NLISRQELDT QIAAVRQAEG
ALKADDGAVA SAQLQLDYSK ITAPISGRIG LKQVDVGNYI TSGDTNGIVV ITQTYPIDVV
FTVPEAEIST IISAQKSGQP PVVEAWDRTN QKKLSQGSLL SMDNQIDTTT GTIKLKARFD
NLDDALFPNQ FVNIRMKVDT LQNAVVAPSA AVQMGNEGRF VWILNDKNEV SKRQVTTSIQ
YGQLVVVTAG LDADVQVVTD GIDRLTEGTK VEVVPSTLTE KTPAITGEKS
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