| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1310 |
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| Symbol | |
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| ID | 8529699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1422138 |
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| End bp | 1425218 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | multidrug efflux system subunit MdtC |
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| Protein accession | YP_003258723 |
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| Protein GI | 261820617 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGTTCT TCGCCCTGTT CATCCACCGC CCCGTCGCCA CCCTGCTGTT GACGTTGGCC
ATCGCGCTCT GTGGCGTATT AGGTTTCCGC CTGCTGCCGG TATCCCCGCT GCCGCAGGTG
GATTTCCCGG TGATCTCGGT CAGCGCCTCG CTGCCCGGCG CATCACCGGA AACCATGGCC
TCTGCCGTCG CGACGCCGCT GGAACGTGCG CTCGGTAGAA TTGCAGGCGT CAACGAAATG
ACATCCACCA GCTCGCTCGG CAGTACGCGC GTCATTCTGG TGTTTAACCT CGATAGGGAT
ATCAACGGCG CGGCGCGCGA TGTGCAGGCG GCCATCAACG CCGCGCAGAA CCTGCTGCCG
TCCGGTATGT CCAACCGCCC GACTTACCGT AAGGTCAACC CATCCGACGC ACCAGTCATG
ATCCTGACGC TGACCTCGGA CACCTACAGC CAGGGCCAAC TGTACGATTT CGCGTCCACC
CAACTGTCAC AGAAAATCTC TCAGATGGAA GGTGTTGGCG ATGTCTCTAT CGGCGGAAGT
TCGCTCCCCG CCGTGCGCGT GGCGCTGAAT CCGGTGGCGT TATTTAACCA AGGCATTTCC
CTCGATGACG TACGGCAGAC TATCGCACAG GCGAATGTGC GCCGGCCGTT AGGGAATGTG
GAAAACAGTC AGAGAAGTTG GCAGATACAA ACCAACGATG AGCTCAAAAC TGCCGATGCT
TATGCACCGC TGATTATCCA CTACAACAAC GGCGCCGCCG TTCGCCTGAG CGACGTCGCC
ACGGTGGAAG ATTCGGTGCA AAACGCCCGC AATGCAGGAA TGGCGAACGC GAAACCTGCC
ATTCTGGTGA TGATTCGCCG CGCGCCGGAT GCCAACATTA TCACCACGGT AGACAACATC
CGCGCCGCGA TGCCGGAACT GCGCGCCAGC CTGCCTGCCG AAATACAGTT GGATGTCGCC
CAGGATCGTT CCCCCACGAT TCGCGCCTCG CTGGCGGAAG TGGAGCAATC ACTGATTATC
GCCGTCGCGC TGGTTATTCT GGTCGTCTTC CTGTTCTTAC GCTCCGGGCG GGCAACCGCT
ATTCCGGCGC TGGCCGTTCC CGTGTCGCTC ATTGGCACCT TCGCCGCCAT GTACCTGTGC
GGCTTCAGCC TGAATAACCT GTCGCTGATG GCGCTCACCA TTGCCACCGG TTTCGTGGTG
GATGATGCCA TCGTGGTATT GGAAAATATT TCCCGCCACA TTGAAGCGGG CATGAAGCCG
CTCCAGGCAT CGCTTCAAGG GGTGAGAGAA GTTGGGTTCA CCGTGTTATC CATGAGCCTG
TCGCTGGTGG CCGTGTTCAT CCCGCTGCTG CTGATGGACG GCCTGCCGGG ACGACTGTTC
CGCGAATTCG CCGTAACGCT GTCGGTAGCG ATCATGATTT CCCTGCTGAT CTCGCTCACG
CTGACGCCGA TGCTGTGCGC ACGACTGCTG CGTGCCGTAC CCAAACGCAG CCAGCCTCGC
ACTCGGGGTT TTAATCGTGT GTTGCTCGCG ATGCAACAAG GCTACGGACG TTCGCTGAAG
TGGGTACTCA ACCATGCCCG CTGGGTTTTG CTGCTCTTGC TGGGCACCAT CGCACTCAAC
GTCTGGCTGT ACATCAGTAT TCCGAAGACT TTCTTCCCGG AACAGGATAC GGGCAGGCTG
ATGGGCTTTA TTCAGGCTGA CCAGAGTATT TCTTTTCAGG CTATGACGGT AAAGCTCCAG
AATTTCATGA CCATTGTCAG CAGCGATCCT GCGGTGGATA ACGTGAACGG TTTTACAGGG
GGATCGCGTA CCAACAGCGG CTCGATGTTT ATTTCGCTTA AGCCGCTTTC TGAACGCGAT
GTTTCCGCTC AACAGGTAAT TAGTCGCCTG CGCGTCAAGC TGGCAAAAGA ACCCGGTGCC
AACCTATTTT TAATGCCAGT GCAGGATATC CGTATCGGCG GACGGGAATC GAGCGCGGGC
TATCAGTACA CACTCCTGTC TGATGATTTG AGCGAACTGC GAACCTGGGA GCCAAAGATT
CGTGCTGCTT TCAGCAAACT GCCTGAGCTG GCCGATGTGA ATTCCGATCA ACAGGATAAA
GGCGCAGAAA TGGCGTTAAC CTACGATCGT GATGCGATGG CACAGTTAGG CATCAACGTC
TCTGCCGCCA ATGCGTTGCT TAACAACGCC TTCGGCCAGC GTCAGATTTC GACCATTTAT
CAGCCGTTAA ACCAGTACAA GGTCGTGATG GAAGTGGACG ACGCCTACAC GCAGGATGTC
AGCTCACTGA ACAAGATGTT CGTCATCAAT AGCGACGGTA AGCCCATCCC GCTTTCTTAT
TTCGCCAGTT GGAAGCCGAT CAACGCGCCG CTGTCGGTGA ATCATCAGGG GCTATCTGCC
GCATCGACCA TCTCTTTTAA CCTGCCTGAA GGCACCGATC TTTCCACTGC GACAGCGGCG
GTAGAAAGAA CCATGACGTC ACTAGGCGTG CCGTCATCGG TACGCGGCCA GTTCTCCGGT
ACGGCACAGG CGTTCCAGCA ATCACAGTCG TCACAGTTGT TGCTCATTCT GGCGGCGATT
ATCACGGTGT ATATCGTACT GGGCGTGCTG TATGAGAGCT ATGTGCATCC GCTGACGATT
CTGTCTACCC TGCCCTCTGC GGGCGTGGGT GCTCTGCTGG CACTGGAGTG GTTTGGCGTA
CCGTTTAGTC TGGTGGCGCT GATAGGTATC ATGCTGTTGA TTGGGATCGT GAAGAAGAAT
GCGATCATGA TGGTGGATTT CGCGCTGGTG GCACAGCGCA GCGGCAAGCT GAGCGCACGG
GACGCCATTT TTCAGGCCTG CCTACTGCGT TTCCGCCCGA TTATGATGAC CACCTTAGCC
GCGCTGTTTG GCGCACTGCC GCTGGTGCTG ACCAGCGGTG ACGGTGCCGA GCTGCGTCAA
CCGCTCGGCA TCACGATTGT CGGCGGGCTG GTGATGAGCC AGATCCTCAC GCTGTATACT
ACCCCGGTGG TGTATCTGTT TTTCGACAAG CTGAGAACGA TGCGGCGTAA AGCCCCAGAG
AAGGATTTGT CACTGTCATA G
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| Protein sequence | MKFFALFIHR PVATLLLTLA IALCGVLGFR LLPVSPLPQV DFPVISVSAS LPGASPETMA
SAVATPLERA LGRIAGVNEM TSTSSLGSTR VILVFNLDRD INGAARDVQA AINAAQNLLP
SGMSNRPTYR KVNPSDAPVM ILTLTSDTYS QGQLYDFAST QLSQKISQME GVGDVSIGGS
SLPAVRVALN PVALFNQGIS LDDVRQTIAQ ANVRRPLGNV ENSQRSWQIQ TNDELKTADA
YAPLIIHYNN GAAVRLSDVA TVEDSVQNAR NAGMANAKPA ILVMIRRAPD ANIITTVDNI
RAAMPELRAS LPAEIQLDVA QDRSPTIRAS LAEVEQSLII AVALVILVVF LFLRSGRATA
IPALAVPVSL IGTFAAMYLC GFSLNNLSLM ALTIATGFVV DDAIVVLENI SRHIEAGMKP
LQASLQGVRE VGFTVLSMSL SLVAVFIPLL LMDGLPGRLF REFAVTLSVA IMISLLISLT
LTPMLCARLL RAVPKRSQPR TRGFNRVLLA MQQGYGRSLK WVLNHARWVL LLLLGTIALN
VWLYISIPKT FFPEQDTGRL MGFIQADQSI SFQAMTVKLQ NFMTIVSSDP AVDNVNGFTG
GSRTNSGSMF ISLKPLSERD VSAQQVISRL RVKLAKEPGA NLFLMPVQDI RIGGRESSAG
YQYTLLSDDL SELRTWEPKI RAAFSKLPEL ADVNSDQQDK GAEMALTYDR DAMAQLGINV
SAANALLNNA FGQRQISTIY QPLNQYKVVM EVDDAYTQDV SSLNKMFVIN SDGKPIPLSY
FASWKPINAP LSVNHQGLSA ASTISFNLPE GTDLSTATAA VERTMTSLGV PSSVRGQFSG
TAQAFQQSQS SQLLLILAAI ITVYIVLGVL YESYVHPLTI LSTLPSAGVG ALLALEWFGV
PFSLVALIGI MLLIGIVKKN AIMMVDFALV AQRSGKLSAR DAIFQACLLR FRPIMMTTLA
ALFGALPLVL TSGDGAELRQ PLGITIVGGL VMSQILTLYT TPVVYLFFDK LRTMRRKAPE
KDLSLS
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