Gene Pecwa_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1309 
Symbol 
ID8529698 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1420325 
End bp1421725 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content56% 
IMG OID 
Productmultidrug efflux system protein MdtE 
Protein accessionYP_003258722 
Protein GI261820616 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCAAC CAGCTTCCGT TCGCTGGCAG CTCTGGATTG TTGCCTTTGG CTTTTTTATG 
CAGACGCTGG ATACCACCAT CGTGAATACC GCGCTGCCTT CGATGGCGGC GAGTCTGAAT
GAAAGCCCGC TGCATATGCA TTCGGTGATT GTTTCCTATG TGCTGACCGT CGCGGTGATG
CTGCCCGCCA GCGGCTGGCT GGCGGATCGT ATCGGCGTGA AGAACATCTT TTTCGCAGCG
ATTCTACTGT TTACGCTGGG GTCGCTGCTG TGTGCCCGTT CGGAAACGTT GGATGAGCTG
CTGCTCTCCC GCGTGATTCA GGGCATTGGT GGCGCGATGA TGGTGCCGGT AGGACGTCTG
ACGGTGATGA AGATCGTCCC GCGCGATCAG TATATGGCGG CAATGACCTT CGTGACGCTG
CCTGGCCAGA TCGGCCCATT ACTGGGGCCG GCGCTCGGCG GTTTTCTGGT GGAGTACGCC
AGTTGGCACT GGATTTTCCT CATCAACCTG CCCGTTGGCA TTCTCGGCGC AGTGGCCACC
TGGTTCCTGA TGCCCAATTA CACCATGCAA ACCCAGCGCT TTGATATCAG CGGTTTCGTT
TGGCTTGCCG TAGGCATGGC GACGCTGACG CTAGCGTTGG ACGGTAACCG TAGTCTCGGC
ATTCCGCCGA TTGCCATTTT CGCGCTGATT GCCATCGGGC TTATCGCACT ATTGAGCTAC
TGGCTGCACG CTCGTCATAA CGAACGGGCG CTGTTCAATC TGCGTTTGTT CGACACCCAT
ACTTTTTCTA TCGGCCTGAC CGGCGGGCTG CTGGCTCGCA TCGGTAGCGG CATGTTGCCG
TTTATGACAC CGCTATTTTT GCAGTTGGGA ATGGGGTTTT CTCCGTTCCA TGCCGGGTTG
ATGATGGTGC CAATGGTACT GGGTAGCATG GGGATAAAAC GCGTCGTGGT GCAGATCGTC
AATCGGTTCG GCTACCGCAA CGTGCTGGTG GCCTCGACGT TATTGCTGGC GCTGGTCACG
GCGCTATTTG CACTGGTCGC GCTTATGCAA TGGATCTGGA TGATTCCGAT TGTGCTGTTC
TTCCTCGGTA CAGTGAACGC TATTCGCTTC TCTACCATGA ACACGCTGAC GTTGAAAGAT
CTGCCTGATT CCCTCGCCAG CGGCGGAAAT AGCCTGCTGT CGATGACCAT GCAGCTCTCT
ACCAGCCTGG GAGTGAGCAT CGCGGGTATC CTGCTGGGTA TGTTTTCTCA ACCGCACATC
GCAGCAGAAA GTGGGGCAAC CCACACGGTA TTTCTCTATA CCTATCTCAG CATGATCGTC
ATCATCGCCC TGCCAGCGTT GATTTTTAAT CGTGTTCCAC CTGACACCGT AAAGCAGTCA
ACGCTAGCGC GTAAATCGTG A
 
Protein sequence
MTQPASVRWQ LWIVAFGFFM QTLDTTIVNT ALPSMAASLN ESPLHMHSVI VSYVLTVAVM 
LPASGWLADR IGVKNIFFAA ILLFTLGSLL CARSETLDEL LLSRVIQGIG GAMMVPVGRL
TVMKIVPRDQ YMAAMTFVTL PGQIGPLLGP ALGGFLVEYA SWHWIFLINL PVGILGAVAT
WFLMPNYTMQ TQRFDISGFV WLAVGMATLT LALDGNRSLG IPPIAIFALI AIGLIALLSY
WLHARHNERA LFNLRLFDTH TFSIGLTGGL LARIGSGMLP FMTPLFLQLG MGFSPFHAGL
MMVPMVLGSM GIKRVVVQIV NRFGYRNVLV ASTLLLALVT ALFALVALMQ WIWMIPIVLF
FLGTVNAIRF STMNTLTLKD LPDSLASGGN SLLSMTMQLS TSLGVSIAGI LLGMFSQPHI
AAESGATHTV FLYTYLSMIV IIALPALIFN RVPPDTVKQS TLARKS