Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1309 |
Symbol | |
ID | 8529698 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1420325 |
End bp | 1421725 |
Gene Length | 1401 bp |
Protein Length | 466 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | multidrug efflux system protein MdtE |
Protein accession | YP_003258722 |
Protein GI | 261820616 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAAC CAGCTTCCGT TCGCTGGCAG CTCTGGATTG TTGCCTTTGG CTTTTTTATG CAGACGCTGG ATACCACCAT CGTGAATACC GCGCTGCCTT CGATGGCGGC GAGTCTGAAT GAAAGCCCGC TGCATATGCA TTCGGTGATT GTTTCCTATG TGCTGACCGT CGCGGTGATG CTGCCCGCCA GCGGCTGGCT GGCGGATCGT ATCGGCGTGA AGAACATCTT TTTCGCAGCG ATTCTACTGT TTACGCTGGG GTCGCTGCTG TGTGCCCGTT CGGAAACGTT GGATGAGCTG CTGCTCTCCC GCGTGATTCA GGGCATTGGT GGCGCGATGA TGGTGCCGGT AGGACGTCTG ACGGTGATGA AGATCGTCCC GCGCGATCAG TATATGGCGG CAATGACCTT CGTGACGCTG CCTGGCCAGA TCGGCCCATT ACTGGGGCCG GCGCTCGGCG GTTTTCTGGT GGAGTACGCC AGTTGGCACT GGATTTTCCT CATCAACCTG CCCGTTGGCA TTCTCGGCGC AGTGGCCACC TGGTTCCTGA TGCCCAATTA CACCATGCAA ACCCAGCGCT TTGATATCAG CGGTTTCGTT TGGCTTGCCG TAGGCATGGC GACGCTGACG CTAGCGTTGG ACGGTAACCG TAGTCTCGGC ATTCCGCCGA TTGCCATTTT CGCGCTGATT GCCATCGGGC TTATCGCACT ATTGAGCTAC TGGCTGCACG CTCGTCATAA CGAACGGGCG CTGTTCAATC TGCGTTTGTT CGACACCCAT ACTTTTTCTA TCGGCCTGAC CGGCGGGCTG CTGGCTCGCA TCGGTAGCGG CATGTTGCCG TTTATGACAC CGCTATTTTT GCAGTTGGGA ATGGGGTTTT CTCCGTTCCA TGCCGGGTTG ATGATGGTGC CAATGGTACT GGGTAGCATG GGGATAAAAC GCGTCGTGGT GCAGATCGTC AATCGGTTCG GCTACCGCAA CGTGCTGGTG GCCTCGACGT TATTGCTGGC GCTGGTCACG GCGCTATTTG CACTGGTCGC GCTTATGCAA TGGATCTGGA TGATTCCGAT TGTGCTGTTC TTCCTCGGTA CAGTGAACGC TATTCGCTTC TCTACCATGA ACACGCTGAC GTTGAAAGAT CTGCCTGATT CCCTCGCCAG CGGCGGAAAT AGCCTGCTGT CGATGACCAT GCAGCTCTCT ACCAGCCTGG GAGTGAGCAT CGCGGGTATC CTGCTGGGTA TGTTTTCTCA ACCGCACATC GCAGCAGAAA GTGGGGCAAC CCACACGGTA TTTCTCTATA CCTATCTCAG CATGATCGTC ATCATCGCCC TGCCAGCGTT GATTTTTAAT CGTGTTCCAC CTGACACCGT AAAGCAGTCA ACGCTAGCGC GTAAATCGTG A
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Protein sequence | MTQPASVRWQ LWIVAFGFFM QTLDTTIVNT ALPSMAASLN ESPLHMHSVI VSYVLTVAVM LPASGWLADR IGVKNIFFAA ILLFTLGSLL CARSETLDEL LLSRVIQGIG GAMMVPVGRL TVMKIVPRDQ YMAAMTFVTL PGQIGPLLGP ALGGFLVEYA SWHWIFLINL PVGILGAVAT WFLMPNYTMQ TQRFDISGFV WLAVGMATLT LALDGNRSLG IPPIAIFALI AIGLIALLSY WLHARHNERA LFNLRLFDTH TFSIGLTGGL LARIGSGMLP FMTPLFLQLG MGFSPFHAGL MMVPMVLGSM GIKRVVVQIV NRFGYRNVLV ASTLLLALVT ALFALVALMQ WIWMIPIVLF FLGTVNAIRF STMNTLTLKD LPDSLASGGN SLLSMTMQLS TSLGVSIAGI LLGMFSQPHI AAESGATHTV FLYTYLSMIV IIALPALIFN RVPPDTVKQS TLARKS
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