| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1300 |
|---|
| Symbol | |
|---|
| ID | 8529689 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1410950 |
|---|
| End bp | 1411744 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | hydroxyethylthiazole kinase |
|---|
| Protein accession | YP_003258713 |
|---|
| Protein GI | 261820607 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.467489 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC AACCCACCGA CTTTTCTGCC GCTCAGGCAG CAACCTCACT CACTCAATTT
CGTTCTGCTT CACCGCTGGT ACACTGTTTG ACCAACGATG TAGTGCAATC TTTTACTGCT
AATGTGTTGT TGGCGTTGAA TGCTTCGCCC GCTATGGTGG TCGATCCTGA TGAAGCCGCG
CAGTTCAGCG TGATGGCAGA TGCATTGCTG ATTAATGTTG GTACGTTGGA ACGCACGCGT
GCCGAGGCGA TGCGTGCAGC CGTAAGCAGC GCGTATCAGG CGGGTACGCC GTGGGTGCTC
GATCCCGTTG CCGTAGGTGG TTTAACTTTC CGTACTGAAT TTTGCCAGGA ATTGCTGACG
TGGAAACCGG CGGCGATTCG CGGCAATGCG TCCGAAATCA TGGCGCTTGC TGGGGTAGCC
GCGCAGGGGA GGGGCGTGGA TAGCACCGAT GATTCGCTGG TGGCTCTCCC TGCTGCGCGC
GAACTGGCCC GGCAGGTGGG GACGATTGTG GCCGTGACCG GAGCAGTGGA TTATGTCACG
GACGGTGAGC GCGATATGGC GGTAGCCGGC GGCGATAGCA TGATGACACG CGTGGTCGGT
ACGGGCTGCG CGCTGTCGGC GGTGGTTGCG GGATTTGCTT CTCTGGAAGG TGATCGCTTA
TCCCACGTGG CGGCGGCGTG CTATGTCATG GCATTAGTAG GGCAACAGGC GGCCTTGGCG
TCGCAAGGTA CGGGGAGTTT TATTCCCAAC TTCCTTGATC GACTCTATAC CTTGCGTGTG
GAGGATCTGG CATGA
|
|---|
| Protein sequence | MNTQPTDFSA AQAATSLTQF RSASPLVHCL TNDVVQSFTA NVLLALNASP AMVVDPDEAA
QFSVMADALL INVGTLERTR AEAMRAAVSS AYQAGTPWVL DPVAVGGLTF RTEFCQELLT
WKPAAIRGNA SEIMALAGVA AQGRGVDSTD DSLVALPAAR ELARQVGTIV AVTGAVDYVT
DGERDMAVAG GDSMMTRVVG TGCALSAVVA GFASLEGDRL SHVAAACYVM ALVGQQAALA
SQGTGSFIPN FLDRLYTLRV EDLA
|
|---|
| |