| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1281 |
|---|
| Symbol | |
|---|
| ID | 8529670 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | - |
|---|
| Start bp | 1393036 |
|---|
| End bp | 1394166 |
|---|
| Gene Length | 1131 bp |
|---|
| Protein Length | 376 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | Choloylglycine hydrolase |
|---|
| Protein accession | YP_003258696 |
|---|
| Protein GI | 261820590 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTAAAA ATAATAAGCG TATTAAGTCT ACGGTATGTG CATTATCATT AGCCGCATTA
ACACTGGGCT CCGCGGTTTC ACTCGCCTGT ACGCGCTTTG TTTATCTGGA CCCACAAAAT
CCTGATTACC CTATTACCGC CCGTTCAATG GACTGGGCAG AGGATACCCA TACTAATCTC
TGGATTTTCC CACGAGAATT AAACCGCTCT GGCGCTGCTG GTCAGTATTC TCTGGAGTGG
ACATCAAAAT ACGGCAGTGT TATTGCCTCT GCTTTTGATG GCGACGAGAA AATGGCTTCC
ACAACCGATG GTTTGAATGA GAAAGGGCTG GCGGCTAACG TGCTATGGTT GGCAGAATCT
GAATACCCTA AAACCAAACC GACAGCGAAA AAACCGGGAT TAAGCGTCGC CGCGTGGGCC
CAGTACGTGT TGGATAATTT TGCTACCGTC GATGAAGCCG TGAAATCGCT ACAACAGGAA
AAATTTATAC TGGTTACCAA AGACGTACCG GGGCAGGACC GGAAGGCAAC ACTGCACCTT
TCATTATCTG ATTCCTCTGG CGACAGTGCG ATTATTGAAT ATATCGACGG CAAACAGGTT
ATTCACCATA ATAAGAGCTA TCAGGTGATG ACCAATTCCC CCACGTTCGA TCAGCAGTTA
GCGCTTAATG CCTATTGGGA TCAGATCGGT GGTAATGTGA TGCTGCCAGG AACAAACCGC
GCAGCCGATC GCTTCGTTCG AGCCTCATTC TATGTGGAAA ATACTACCCC GAATAAACTC
ATTCCTGGGA TAGCAGAGAA AAGTAAAATA GAAAAAGACA AAGCGGACTT AGCCACTGCA
TTCAGTATCA TACGTAATGT GTCGGTTCCT TATGGCTATT CCTTACCTAA CGTGCCGAAT
ATTGCCTCAA CGCGCTGGCG TACCGTTATC GACCATACAT CACTGCAATA CTTCTTTGAA
TCTGCTGTTT CTCCCAATAT CTTTTGGGTT GACTTGAAGA AGATCGATTT TGCTCCGCGA
GGAAATAGCG CCAGCAAGTT AGATTTAGGG CCAAACCAAA GTATAATTTA CTCTGGCCAA
GCCTCAGGGC ATTTTAAACC TGCTACACCA TTTAAATTTG CAGGACTATA A
|
|---|
| Protein sequence | MIKNNKRIKS TVCALSLAAL TLGSAVSLAC TRFVYLDPQN PDYPITARSM DWAEDTHTNL
WIFPRELNRS GAAGQYSLEW TSKYGSVIAS AFDGDEKMAS TTDGLNEKGL AANVLWLAES
EYPKTKPTAK KPGLSVAAWA QYVLDNFATV DEAVKSLQQE KFILVTKDVP GQDRKATLHL
SLSDSSGDSA IIEYIDGKQV IHHNKSYQVM TNSPTFDQQL ALNAYWDQIG GNVMLPGTNR
AADRFVRASF YVENTTPNKL IPGIAEKSKI EKDKADLATA FSIIRNVSVP YGYSLPNVPN
IASTRWRTVI DHTSLQYFFE SAVSPNIFWV DLKKIDFAPR GNSASKLDLG PNQSIIYSGQ
ASGHFKPATP FKFAGL
|
|---|
| |