| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1261 |
|---|
| Symbol | |
|---|
| ID | 8529650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pectobacterium wasabiae WPP163 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013421 |
|---|
| Strand | + |
|---|
| Start bp | 1375273 |
|---|
| End bp | 1376454 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | |
|---|
| Product | outer membrane protein assembly complex subunit YfgL |
|---|
| Protein accession | YP_003258682 |
|---|
| Protein GI | 261820576 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.21096 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTGC GTAAAACACT GTTGGTAGGA CTGGTTTCTG TTGCCCTGCT GAGCGGATGC
TCGCTGTTTA ACAGCGAAGA AGATGTCGTC GCTATGTCTC CATTGCCGAA GGTGGAAAAT
CAGTTCACGC CAACCAAAGT GTGGAACAGC TCGGTTGGGA GTGGCATTGG TGAATTTTAT
TCCAATCTTC ACCCAGCATG GCAAGATAAT CGCGTTTTTG CCGCCGATCG TCGTGGCACC
GTAAAAGCGA TGGATTTGAA TGATGGCAAA GAGGTGTGGC GCGCCGACCT GTCCGAGAAA
ACCAATTTCT TCTCTCGCAA TAATCCAGCA CTGCTGTCTG GCGGCGTGGC GATTTCTGGT
AACCATGTCT ATGTCGGCAG CGAAAAGGCG CAGGTCTATG CGCTGAATGC GGAAGATGGT
ACGCCGGTGT GGCAGGCGAA AGTGGCCGGC GAAGCGCTGT CCCGCCCTGT GGTCAGCGAT
GGTGTGGTGC TGATCCACAC TAGCAACGGT ATGCTGCAGG CCTTGAATGA AGCGGATGGC
GCAATCAAGT GGAGCGTCAA TCTGGATATG CCGACGCTGT CTCTGCGCGG TGAATCTGCA
CCGACAACCG CGTTTGGTGC GGCGATTGTC GGCGGTGACA ATGGTCGTGT GAATGCCGTC
ATGATCAATC AGGGTCAGCT CATCTGGCAA CAGCGTATTT CGCAGCCGAG TGGCGCAACC
GAAATCGATC GTTTGAATGA TGTCGACACA ACACCTGTTG TTGCGGGCGA AGTGGTATAC
GCATTGGGTT ACAATGGCAA CATGACCGCG CTGGATCTGC GTTCTGGTCA GGTTTTGTGG
AAGCGTGAAC TGGGTTCAGT GCATGATTTC ATCATTGACG GCGACCGCAT CTATCTGGTC
GATCAGGACG ATCGCGTCGT TGCATTGAAC ACCAACGGCG GCGTGAGCCT GTGGCGTCAA
AGCGATTTGC TGCACCGCAA CTTAACGGCT CCGGCACTGT ATAACGGCTA TCTGGTTGTG
GGCGATGCTG AAGGGTATCT GCACTGGCTG AATACGGCAG ATGGTCGCTT TGTGGCGCAA
CAAAAAGTGG ATAGCTCTGG TTTCCTGAGC AAGCCTGTCG TTGCCAGCGA CAAGCTGTTG
ATTCAGGCGA AAAACGGTGA TGTCTACGCG TTTACTCGCT AG
|
|---|
| Protein sequence | MQLRKTLLVG LVSVALLSGC SLFNSEEDVV AMSPLPKVEN QFTPTKVWNS SVGSGIGEFY
SNLHPAWQDN RVFAADRRGT VKAMDLNDGK EVWRADLSEK TNFFSRNNPA LLSGGVAISG
NHVYVGSEKA QVYALNAEDG TPVWQAKVAG EALSRPVVSD GVVLIHTSNG MLQALNEADG
AIKWSVNLDM PTLSLRGESA PTTAFGAAIV GGDNGRVNAV MINQGQLIWQ QRISQPSGAT
EIDRLNDVDT TPVVAGEVVY ALGYNGNMTA LDLRSGQVLW KRELGSVHDF IIDGDRIYLV
DQDDRVVALN TNGGVSLWRQ SDLLHRNLTA PALYNGYLVV GDAEGYLHWL NTADGRFVAQ
QKVDSSGFLS KPVVASDKLL IQAKNGDVYA FTR
|
|---|
| |