Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1218 |
Symbol | |
ID | 8529607 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1326255 |
End bp | 1326944 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | transglutaminase family protein cysteine peptidase BTLCP |
Protein accession | YP_003258639 |
Protein GI | 261820533 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGACTCT CCAGATTCAA GCTCTCCAGT TACAAGCTCT TCTTTATTAG CTGTCTGCTG TTTCTGCTGG CGGGTTCTCT ACGTGCGGAC TGGGATTTTA TTACCATTAA TCAGCGGACC GAGCAGCTTT ATGGCCCGGC AATGCCCGAC GCTCGCCGTC GGATAGATGA ATGGCAAACG CTGTTGGTCA ATTCCCGCAA TAAAAACGAA AAAGCGCTGC TGAGTAGCGT GAACCAGTTT TTCAACGATC GTATGCTGTT TCGCGATGAT ATTGTCGTCT GGAATCAGGA AGATTACTGG GCAACACCGA TTGAAGCACT GCGCAAAGGC GCTGGAGATT GTGAGGATTA TGCGCTTGCC AAGTATTTTA CCCTGCGCCA TTTAGGCGTT CCAGCGGACA AATTACGCAT TACCTATGTT AAAGCCTTGC GTCTGAATAA AGCGCATATG GTGCTCACCT ATTACCCTAC GCCAACGTCA ATTCCGCTGG TGTTGGATAA TCTGACTGAC AAGATCCAAC CTGCGACAGA GCGCAACGAT TTAGTTCCGG TGTACGCCTT TAATGGCGGT GGTCTCTGGC TACCGGGGGC AAGCGGCAGC AACAAACGCG TCGGTGACAG TAAACGACTT TCACGCTGGC AGGATGTATT AACCAAAATG CGAGCCGAAG GGTTTTCAAT TGAGGAGTAA
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Protein sequence | MRLSRFKLSS YKLFFISCLL FLLAGSLRAD WDFITINQRT EQLYGPAMPD ARRRIDEWQT LLVNSRNKNE KALLSSVNQF FNDRMLFRDD IVVWNQEDYW ATPIEALRKG AGDCEDYALA KYFTLRHLGV PADKLRITYV KALRLNKAHM VLTYYPTPTS IPLVLDNLTD KIQPATERND LVPVYAFNGG GLWLPGASGS NKRVGDSKRL SRWQDVLTKM RAEGFSIEE
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