Gene Pecwa_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1213 
Symbol 
ID8529602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand
Start bp1312114 
End bp1314330 
Gene Length2217 bp 
Protein Length738 aa 
Translation table11 
GC content51% 
IMG OID 
Producttype I secretion system ATPase 
Protein accessionYP_003258634 
Protein GI261820528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.466678 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTTGC ACTCAGTACA AGAGACGAAG GGTTCTGATG AATTGGTCAC CCATGAGCCT 
ACCATTCATG AACCCATCGT CCATGAAAAT AGTGACCCTC GCAGCCGCCA TGATGATCCT
TTATTGGATG GTTTGCTGAT CCTCTGTGCC TTGCAGGGGA AATCTGTCAG CCGTACCACA
CTCACCGCTG GTTTGCCCTT AGCTAACCAG CGATTGTCCG TAAAATTGCT CCCAAGAGCC
GCTGCTCGCG CAGGATTACA GGGGCGTGTT CTCAAACGCT CCCTGAATAA AATTTCTGAG
ATGTCACTCC CTGCGATGTT GCTGTTACGG GAAGGTGGAG CAGCAATTCT GTTAGGCTGG
AACGTCGATG GCAGTGCACG ATTGATGCCC AGTGAAACAG AAGGCGGGGA AATTTCCGTT
GAGCATAATA CGCTGCAACA GAATTACCTT GGCTTAGTGA TGTTCGCCCA GCCTCGCCAT
CAGTTCGATC TGCAAAATCC GTCGCTGATC CCCCATACCA AATCCTGGTT TAGAGATACG
CTTAAGCTCT CACGTTCGCT CTATCTCGAT GCCATCCTCG CCAGTTTGCT GGTGAACATT
ATCGCACTGG CCACGCCGCT CTTCGTGATG AATGTCTATG ACAGGGTTGT GCCTAATCAA
GCAACGGCGA CATTGTGGGT GCTGGCTATC GGCGTTACTG GCGCTTTTGT TTTCGATTTG
ATACTCAAAA CGCTGCGTGG CATTTGCCTT GATATGGCAG GGAAAAAAAC CGATCTGATT
ATTTCTGCCA CGTTATTTGA ACGTATTACC GGTATGTCGA TGAAAGCTCG GCCACCGCGA
GTCGGTAGTT TTGCGCAAAA TATTCATGAA TTTCAGTCAC TCAGAGATTT TTTGTCCTCA
CTAACGCTGA CGACGCTGAT CGATTTTCCC TTTACGCTGC TTCTGCTGTT AGTTATCGGT
ATCATCGGCG GCCCGCTGGT CTGGGTTTCC GTTCTGGCCT ACCCTATCGC CCTGCTGGCG
AGTTGGGCAA TGCAAAAACC GCTGTCTGCC ACGATTGAAA AAACAATGCA CCTTGCCAGT
GAACGGCAGG CTACGCTGAT CGAAACGTTG AGCTGTCTGG ATGCAATCAA AGTTAATAAT
GCAGAAAGCG AGCGGCAGCA CCAGTGGGAA CAGACGATTG GCAGCCTGAG CAAGCTGGAA
ATGCGGGTGA AGGCGTTGTC TTCACTGGCG GTAAACCTGA CGCAATGGTT CCAGCAATTT
GCTGGCGTGG CTATGATTGT CGTCGGCGTC TATCTGCTGA TTAACGGCAA ACTCAGCATG
GGTGGGCTGA TTGCCTGTTA CATGCTGAAC GGCAGAGCGC TTATGCCGTT AGGTCAACTG
TCTGGTCTGG TTAGTCGTTA TCAGCAGGCG CGTTTGACGA TGCAAACCAC CGAACAGATG
ATGCAACTAC CGCAAGAGCG TAGCGATAAC GAACACCCGC TGAAGCGCGA AAGCATCCGA
GGTGGGATCG AATTTCGCGA TGTGACGTTC AACTACCCGG AACAGAAAAC CAGTTCGCTG
CAAAGTATCA GTCTGACCAT CGCTCCCGGC GAGAAAGTGG GCGTCATTGG TCGCAGCGGT
TCAGGAAAAA GCTCATTGCA AAAGCTGATC GTGAACCTCT ATCAGCCCAA CACGGGTAAT
ATTCTGATCG ACGGGGTTGA TGCCCGTCAG TTGGATGTCA GTGATTTACG CCACAATATC
GGTTATGTTC CTCAGGATAT TCAGTTATTC AGTGGGTCGC TGCGCAATAA TCTTATTAGT
GGCGCACGCT ATGTCGAAGA TGAAGCCATG CTAAGAGCGG CTGAAATTTC AGGGGTAAAC
GAGTTTGCAC GCCTGCACCC CGATGGCTAC AACCTTCAGG TCGGTGAACG CGGGCAACAA
CTTTCTGGCG GGCAGCGTCA GGCTGTCGCG ATAGCAAGAG CACTATTGCT TGACCCTCCG
ATTCTGGTAC TGGATGAACC CACCAGTTCG ATGGATAACA CCAGCGAAGA TCGGCTAAAA
CAAGCTCTCA CCCCTATAAT TGCAGAGAAA ACGCTGTTGC TGGTTACCCA TCGGGTTTCC
ATGTTGGCAC TGGTCGATCG TTTAGTGATT GTCGATAAAG GCAAAATTAT TGCAGATGGG
CCGAAAGCGA TCGTGATGGA TGCGTTGAAG AAGGGGCAGA TCAATGCGTC TCGGTAA
 
Protein sequence
MKLHSVQETK GSDELVTHEP TIHEPIVHEN SDPRSRHDDP LLDGLLILCA LQGKSVSRTT 
LTAGLPLANQ RLSVKLLPRA AARAGLQGRV LKRSLNKISE MSLPAMLLLR EGGAAILLGW
NVDGSARLMP SETEGGEISV EHNTLQQNYL GLVMFAQPRH QFDLQNPSLI PHTKSWFRDT
LKLSRSLYLD AILASLLVNI IALATPLFVM NVYDRVVPNQ ATATLWVLAI GVTGAFVFDL
ILKTLRGICL DMAGKKTDLI ISATLFERIT GMSMKARPPR VGSFAQNIHE FQSLRDFLSS
LTLTTLIDFP FTLLLLLVIG IIGGPLVWVS VLAYPIALLA SWAMQKPLSA TIEKTMHLAS
ERQATLIETL SCLDAIKVNN AESERQHQWE QTIGSLSKLE MRVKALSSLA VNLTQWFQQF
AGVAMIVVGV YLLINGKLSM GGLIACYMLN GRALMPLGQL SGLVSRYQQA RLTMQTTEQM
MQLPQERSDN EHPLKRESIR GGIEFRDVTF NYPEQKTSSL QSISLTIAPG EKVGVIGRSG
SGKSSLQKLI VNLYQPNTGN ILIDGVDARQ LDVSDLRHNI GYVPQDIQLF SGSLRNNLIS
GARYVEDEAM LRAAEISGVN EFARLHPDGY NLQVGERGQQ LSGGQRQAVA IARALLLDPP
ILVLDEPTSS MDNTSEDRLK QALTPIIAEK TLLLVTHRVS MLALVDRLVI VDKGKIIADG
PKAIVMDALK KGQINASR