| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1213 |
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| Symbol | |
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| ID | 8529602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | - |
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| Start bp | 1312114 |
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| End bp | 1314330 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_003258634 |
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| Protein GI | 261820528 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.466678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTGC ACTCAGTACA AGAGACGAAG GGTTCTGATG AATTGGTCAC CCATGAGCCT
ACCATTCATG AACCCATCGT CCATGAAAAT AGTGACCCTC GCAGCCGCCA TGATGATCCT
TTATTGGATG GTTTGCTGAT CCTCTGTGCC TTGCAGGGGA AATCTGTCAG CCGTACCACA
CTCACCGCTG GTTTGCCCTT AGCTAACCAG CGATTGTCCG TAAAATTGCT CCCAAGAGCC
GCTGCTCGCG CAGGATTACA GGGGCGTGTT CTCAAACGCT CCCTGAATAA AATTTCTGAG
ATGTCACTCC CTGCGATGTT GCTGTTACGG GAAGGTGGAG CAGCAATTCT GTTAGGCTGG
AACGTCGATG GCAGTGCACG ATTGATGCCC AGTGAAACAG AAGGCGGGGA AATTTCCGTT
GAGCATAATA CGCTGCAACA GAATTACCTT GGCTTAGTGA TGTTCGCCCA GCCTCGCCAT
CAGTTCGATC TGCAAAATCC GTCGCTGATC CCCCATACCA AATCCTGGTT TAGAGATACG
CTTAAGCTCT CACGTTCGCT CTATCTCGAT GCCATCCTCG CCAGTTTGCT GGTGAACATT
ATCGCACTGG CCACGCCGCT CTTCGTGATG AATGTCTATG ACAGGGTTGT GCCTAATCAA
GCAACGGCGA CATTGTGGGT GCTGGCTATC GGCGTTACTG GCGCTTTTGT TTTCGATTTG
ATACTCAAAA CGCTGCGTGG CATTTGCCTT GATATGGCAG GGAAAAAAAC CGATCTGATT
ATTTCTGCCA CGTTATTTGA ACGTATTACC GGTATGTCGA TGAAAGCTCG GCCACCGCGA
GTCGGTAGTT TTGCGCAAAA TATTCATGAA TTTCAGTCAC TCAGAGATTT TTTGTCCTCA
CTAACGCTGA CGACGCTGAT CGATTTTCCC TTTACGCTGC TTCTGCTGTT AGTTATCGGT
ATCATCGGCG GCCCGCTGGT CTGGGTTTCC GTTCTGGCCT ACCCTATCGC CCTGCTGGCG
AGTTGGGCAA TGCAAAAACC GCTGTCTGCC ACGATTGAAA AAACAATGCA CCTTGCCAGT
GAACGGCAGG CTACGCTGAT CGAAACGTTG AGCTGTCTGG ATGCAATCAA AGTTAATAAT
GCAGAAAGCG AGCGGCAGCA CCAGTGGGAA CAGACGATTG GCAGCCTGAG CAAGCTGGAA
ATGCGGGTGA AGGCGTTGTC TTCACTGGCG GTAAACCTGA CGCAATGGTT CCAGCAATTT
GCTGGCGTGG CTATGATTGT CGTCGGCGTC TATCTGCTGA TTAACGGCAA ACTCAGCATG
GGTGGGCTGA TTGCCTGTTA CATGCTGAAC GGCAGAGCGC TTATGCCGTT AGGTCAACTG
TCTGGTCTGG TTAGTCGTTA TCAGCAGGCG CGTTTGACGA TGCAAACCAC CGAACAGATG
ATGCAACTAC CGCAAGAGCG TAGCGATAAC GAACACCCGC TGAAGCGCGA AAGCATCCGA
GGTGGGATCG AATTTCGCGA TGTGACGTTC AACTACCCGG AACAGAAAAC CAGTTCGCTG
CAAAGTATCA GTCTGACCAT CGCTCCCGGC GAGAAAGTGG GCGTCATTGG TCGCAGCGGT
TCAGGAAAAA GCTCATTGCA AAAGCTGATC GTGAACCTCT ATCAGCCCAA CACGGGTAAT
ATTCTGATCG ACGGGGTTGA TGCCCGTCAG TTGGATGTCA GTGATTTACG CCACAATATC
GGTTATGTTC CTCAGGATAT TCAGTTATTC AGTGGGTCGC TGCGCAATAA TCTTATTAGT
GGCGCACGCT ATGTCGAAGA TGAAGCCATG CTAAGAGCGG CTGAAATTTC AGGGGTAAAC
GAGTTTGCAC GCCTGCACCC CGATGGCTAC AACCTTCAGG TCGGTGAACG CGGGCAACAA
CTTTCTGGCG GGCAGCGTCA GGCTGTCGCG ATAGCAAGAG CACTATTGCT TGACCCTCCG
ATTCTGGTAC TGGATGAACC CACCAGTTCG ATGGATAACA CCAGCGAAGA TCGGCTAAAA
CAAGCTCTCA CCCCTATAAT TGCAGAGAAA ACGCTGTTGC TGGTTACCCA TCGGGTTTCC
ATGTTGGCAC TGGTCGATCG TTTAGTGATT GTCGATAAAG GCAAAATTAT TGCAGATGGG
CCGAAAGCGA TCGTGATGGA TGCGTTGAAG AAGGGGCAGA TCAATGCGTC TCGGTAA
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| Protein sequence | MKLHSVQETK GSDELVTHEP TIHEPIVHEN SDPRSRHDDP LLDGLLILCA LQGKSVSRTT
LTAGLPLANQ RLSVKLLPRA AARAGLQGRV LKRSLNKISE MSLPAMLLLR EGGAAILLGW
NVDGSARLMP SETEGGEISV EHNTLQQNYL GLVMFAQPRH QFDLQNPSLI PHTKSWFRDT
LKLSRSLYLD AILASLLVNI IALATPLFVM NVYDRVVPNQ ATATLWVLAI GVTGAFVFDL
ILKTLRGICL DMAGKKTDLI ISATLFERIT GMSMKARPPR VGSFAQNIHE FQSLRDFLSS
LTLTTLIDFP FTLLLLLVIG IIGGPLVWVS VLAYPIALLA SWAMQKPLSA TIEKTMHLAS
ERQATLIETL SCLDAIKVNN AESERQHQWE QTIGSLSKLE MRVKALSSLA VNLTQWFQQF
AGVAMIVVGV YLLINGKLSM GGLIACYMLN GRALMPLGQL SGLVSRYQQA RLTMQTTEQM
MQLPQERSDN EHPLKRESIR GGIEFRDVTF NYPEQKTSSL QSISLTIAPG EKVGVIGRSG
SGKSSLQKLI VNLYQPNTGN ILIDGVDARQ LDVSDLRHNI GYVPQDIQLF SGSLRNNLIS
GARYVEDEAM LRAAEISGVN EFARLHPDGY NLQVGERGQQ LSGGQRQAVA IARALLLDPP
ILVLDEPTSS MDNTSEDRLK QALTPIIAEK TLLLVTHRVS MLALVDRLVI VDKGKIIADG
PKAIVMDALK KGQINASR
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