Gene Pecwa_1204 details

Gene Information

• Locus tag: Pecwa_1204
• Symbol: rnc
• ID: 8529593
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1303355
• End bp: 1304035
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 49%
• Product: ribonuclease III
• Protein accession: YP_003258625
• Protein GI: 261820519

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.401784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCCCA TCCTGATAAA TCGTTTACAA AGAAAGCTGG GCTATACTTT TCAGCAGTAC 
GAGCTTTTAT TACAGGCGTT GACACATCGC AGCGCCAGCA GCAAACATAA TGAAAGGCTC 
GAATTCCTGG GTGACTCTAT CCTGAGTTTT GTGATCGCTA ATGCGCTGTA TCATCGTTTT 
CCCAAGGTTG ATGAGGGAGA CATGAGTCGG ATGCGAGCCA CTCTGGTGCG GGGGAATACT 
CTGGCAGAAA TCGCGCGTGA ATTCGAACTG GGAGAGTGCT TACGCCTCGG CCCCGGTGAG 
TTAAAAAGCG GTGGTTTCCG TCGCGAATCG ATATTGGCTG ATACAGTCGA AGCGCTGATC 
GGTGGCATTT TCCTCGACAG TGACATTCTG AACATCGAAC GTTTGATCTT GAATTGGTAT 
CAAACGCGCT TGGATGAAAT CAGTCCCGGC GATAAGCAAA AAGATCCGAA AACGCGGCTG 
CAGGAATTTC TGCAAGGGCG TCACTTACCT TTGCCAACCT ATCTGGTGGT ACAGGTTCGT 
GGGGAAGCAC ACGATCAGGA ATTTACTATC CACTGTCAGG TGAGCGGCTT TAGTGAGTCG 
GTCATTGGTA CAGGATCGAG CCGTCGTAAA GCCGAACAGG CTGCGGCTGA ACAAGCGTTG 
AAAAAACTGG AGCTTGAATG A 

 

Protein sequence

MNPILINRLQ RKLGYTFQQY ELLLQALTHR SASSKHNERL EFLGDSILSF VIANALYHRF 
PKVDEGDMSR MRATLVRGNT LAEIAREFEL GECLRLGPGE LKSGGFRRES ILADTVEALI 
GGIFLDSDIL NIERLILNWY QTRLDEISPG DKQKDPKTRL QEFLQGRHLP LPTYLVVQVR 
GEAHDQEFTI HCQVSGFSES VIGTGSSRRK AEQAAAEQAL KKLELE