Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1200 |
Symbol | rseB |
ID | 8529589 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1298594 |
End bp | 1299556 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | |
Product | periplasmic negative regulator of sigmaE |
Protein accession | YP_003258621 |
Protein GI | 261820515 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000042715 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCACG TTTGGTCCGC CGCCTGTTTT CTGATTGGCA GCCTGTTTTA TTCTACTTTC GCCCCGGCTC AAAATGTTGA GCCGGGCGCG TTGCTGCAGC AGATGAATGG CGCAGTTCGT TCTCTGAATT ACGAAATTTC ATTTATCAAC ATCACCCCGC AAGGATTCGA ATCGGTACGG TATCGTCATG CCGTGGTCAA TAACCATTCC TTGGCGCAAC TGCTGTTTAT GGATGGCCCG CGGCGCGAAA TTGTGCAGCG TGGCAATGAG GTCAGCTACT TCGATCCCGG TTTTGAGCCA TTTACGCTCA CCAGCGATCA TATCGTCGAC TCTCTTCCTT CCCTCGTCTT TGCCGATTTC CAGAAGTTAT CGCCCTATTA TGATTTTGTT CCCGCAGATG GGCGGGTGCG TATTGCCGAT CGTCTGGCTC TGGGAGTTCG CGTTATTTCA CGCGATGGCA CACGCTACAG CTATACCGTG TGGATTGATG CGGAATCTAA ACTTCCACTG CGTATCGATT TACAGGATCG TAATGGTGAC AAGCGGTTGG AACAATTCTT AACAACATCG CTGATTGTTG ACGATGATGT GGTTAGCGTA ATGCGTCCGC TAGAAGGGAT CACACTGCCT TCTGTTCTAC CTGCGCCTGC CGCAGAAAAA GGCAATTTTT CTTGGGAGCC AGAATGGTTG CCTACAGGAA TGAAAGCGCT TTCGCACAGC AAAAAAATCT TGCCCGGTTC ATCTATTCCG ATCGAAACAC GCCTGTACAG CGATGGTTTG TTTAGTTTTT CGATTAATAT TAGCCCGTCT TCTGACGTGA GTGAGGAGCA GTCACTGCTC ACTGGTCGAC GCTCTATTCA CACTGTTATG CGGGGAAATC GTGAGATTAC CGTTGTCGGT GATATTCCAC CTTCTACGGC TAAACGAATC GCTGACAGCA TCCTTTTGAC GGCTCAGCCA TGA
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Protein sequence | MKHVWSAACF LIGSLFYSTF APAQNVEPGA LLQQMNGAVR SLNYEISFIN ITPQGFESVR YRHAVVNNHS LAQLLFMDGP RREIVQRGNE VSYFDPGFEP FTLTSDHIVD SLPSLVFADF QKLSPYYDFV PADGRVRIAD RLALGVRVIS RDGTRYSYTV WIDAESKLPL RIDLQDRNGD KRLEQFLTTS LIVDDDVVSV MRPLEGITLP SVLPAPAAEK GNFSWEPEWL PTGMKALSHS KKILPGSSIP IETRLYSDGL FSFSINISPS SDVSEEQSLL TGRRSIHTVM RGNREITVVG DIPPSTAKRI ADSILLTAQP
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