Gene Pecwa_1188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1188 
Symbol 
ID8529571 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand- 
Start bp1284136 
End bp1284717 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content55% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003258609 
Protein GI261820503 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCCGTG TATCAAAGCA GCAGATGGAG CGTAACCGAG AGGAAATCAT CCAGGTTTCT 
TCACAGCTCT TTCGTGAACG GGGCCTGAAC GGCGTCAGCG TGAACGATTT GATGGCTGCG 
GCCGGGTTAA CCCACGGTGG CTTTTATGGT CATTTTGCCT CCAAAGATGA ACTCGCTGCC 
ATCGCCAGCC GAAAAGCGCT TGAGGATTCT CATTCGCGCT GGCAGGAAAT AAGCCAGCAC 
GCCGATCAAC ATGATCTACA AACGATGGTG GAGCACTATC TTTCCCCCAA CCACCGTGAC 
TGCGCCAAAG ATGGCTGTGC GATCACCGCG TTAGCTAGCG ACATCGCCAG AGAAAGTGAG 
GATAAACCGG TACGCGAGGT TTATCTCAAG GGTGTCAGGG CCATGCTGGG CAGGCTGGAA 
TCCCTCTCTA CGATAGAAGA TAAAGAACAG CGTAGGCTGC ATGCTATGGC GCAATTCGCG 
CTGCTGTCTG GCGCGCTAAC GTTAGCCCGC GCAACGGCTG GCGATGCCTT GTCGGACGAC 
TTCCTTATCG CCGCCAAAAA AGCGCTGCTT GGCGAAGCAT AG
 
Protein sequence
MARVSKQQME RNREEIIQVS SQLFRERGLN GVSVNDLMAA AGLTHGGFYG HFASKDELAA 
IASRKALEDS HSRWQEISQH ADQHDLQTMV EHYLSPNHRD CAKDGCAITA LASDIARESE 
DKPVREVYLK GVRAMLGRLE SLSTIEDKEQ RRLHAMAQFA LLSGALTLAR ATAGDALSDD 
FLIAAKKALL GEA