Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1182 |
Symbol | |
ID | 8529565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1277776 |
End bp | 1278933 |
Gene Length | 1158 bp |
Protein Length | 385 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | carbohydrate diacid transcriptional activator CdaR |
Protein accession | YP_003258603 |
Protein GI | 261820497 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGTCGT ATCATCTCAA TGCCAAGATG GCACAGGATA TTGTCGCGCG AACCATGCAG ATCATTGATA GTAATATCAA CGTGATGGAT GCTCGCGGTA AAATTATCGG CAGTGGCGAT CAGGAACGAT TGGGGGAATT GCACGAAGGG GCGCTGTTGG CGCTCTCGCA GGGGCGGGTT GTCGATATTG ATGATGCTGT GGCGCGCCAC CTGCACGGCG TGCGTCCGGG TATCAATTTA CCTTTGCGTA TTGATGGCGA GATTGTTGGC GTTATCGGCC TGACAGGGAA TCCCAGCCAA CTGCGACAAT ACGGCGAACT TGTCTGTATG ACAGCGGAAA TGATGCTGGA GCAGGCGAGG CTGTTGCATA TGCTGGCACA GGACAGTCGT CTGCGCGAAG AACTGGTGTT GAACCTGGTT CGTACCGACG ATTTGTCTCC TGCGCTCATG GAGTGGGCGC AGCGTTTAGG CATCGATCTG AATAAGCCCC GTGTGGCCGC AGTGATCGAA GTGGACAGCG GGCAGCTTGG CGTAGACTCC GCTATGGCAG AACTACAGCA GTTGCAGACG CTGCTGACTA CGCCGGAGCG TGACAACCTG ATCGCGATTG TCTCTCTAAC GGAAATGGTG GTACTAAAAC CGGCGCTGAA CAGCCACGGG CGTTGGGATG CAGAAGAGCA TCGACGTCGC GTGGATACGC TGATGTCGCG CATGGCAGAA AGTAGCCGAC TGCGGGTGCG ACTGGCGTTG GGGAACTATT TTTCTGGCCC CGGCAGTATC GCGCGGTCTT ATCGCACGGC GCGAACGACA ATGAGCGTAG GCAAACAGCG TATGCCCGCT CAACGTTGTT ATTACTATCA GGATTTGATG TTGCCCGTGC TGCTGGATAG TCTGCGCGGT GGTTGGCAGG CAAACGAACT GGTACGCCCG CTTTCTAAGC TCAAGGCGAT GGACGGTAAT GGTCTGCTGC GCCGGACGCT GGGTGCCTGG TTCCGTAATA ACGTTCAACC CGGTGCGACG GCGAAAGCGC TGTTTATCCA CCGTAATACG CTGGAGTATC GTCTTAATCG TATCTCTGAA CTGACGGGAT TGGATCTGGG GAATTTCGAC GACCGCCTGC TGCTGTACGT CGCTTTACAA CTGGATGAAG AAGAGTAG
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Protein sequence | MASYHLNAKM AQDIVARTMQ IIDSNINVMD ARGKIIGSGD QERLGELHEG ALLALSQGRV VDIDDAVARH LHGVRPGINL PLRIDGEIVG VIGLTGNPSQ LRQYGELVCM TAEMMLEQAR LLHMLAQDSR LREELVLNLV RTDDLSPALM EWAQRLGIDL NKPRVAAVIE VDSGQLGVDS AMAELQQLQT LLTTPERDNL IAIVSLTEMV VLKPALNSHG RWDAEEHRRR VDTLMSRMAE SSRLRVRLAL GNYFSGPGSI ARSYRTARTT MSVGKQRMPA QRCYYYQDLM LPVLLDSLRG GWQANELVRP LSKLKAMDGN GLLRRTLGAW FRNNVQPGAT AKALFIHRNT LEYRLNRISE LTGLDLGNFD DRLLLYVALQ LDEEE
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