Gene Pecwa_1172 details

Gene Information

• Locus tag: Pecwa_1172
• ID: 8529555
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1267168
• End bp: 1267758
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 53%
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_003258593
• Protein GI: 261820487

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCGATC CTTCTTTTTT CAGCTACGTC ACCGTGATGT CGATCACGCC GGGGCCAAAT 
AATCTGCTGC TGGCAACATC AGGCGTCAAT TTTGGCCTGC GTCGAACTTT GCCGATGATG 
ATGGGCATTT CCGTTGGATG TGGGATACAA ACGGCGCTGA TGGGGGTGGC ATTGGAGCTT 
CTGCTGAGCT GGATGAGTAT GATTCGCCTC CCGCTCACCG TGCTGGGCTG CATCTATCTA 
CTGTGGCTAT CGTGGAAAAT AGTGCGCTCA TCGGCACCTG AATTACAAGG GCGAGTACAG 
CCGATGACCG TACTACAAGG GACGCTATTC CAAGCGGTGA ATCCGAAAGC CTGGCTGATG 
TCCAGCAACA TTGCGCTGCT TTATGCCGCC AGCGGCGGCC TTTTCACCAC GGTAGCCGCC 
TTTATGGTAC TCAATCTGCC CTGTATTTTA GTCTGGGCGC TACTCGGCGA TCGCATCGGT 
AAACATCTTC AGGAACCGTG GAAACTGAAA GCCTTCAACG GCGTCATGGC ACTTTCTCTG 
GTGCTCACTA CGTTCTGGAT GTTAGTCGAA GCCATCAACT TCTCCAGCTA A 

 

Protein sequence

MLDPSFFSYV TVMSITPGPN NLLLATSGVN FGLRRTLPMM MGISVGCGIQ TALMGVALEL 
LLSWMSMIRL PLTVLGCIYL LWLSWKIVRS SAPELQGRVQ PMTVLQGTLF QAVNPKAWLM 
SSNIALLYAA SGGLFTTVAA FMVLNLPCIL VWALLGDRIG KHLQEPWKLK AFNGVMALSL 
VLTTFWMLVE AINFSS