Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1170 |
Symbol | |
ID | 8529553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | + |
Start bp | 1264188 |
End bp | 1265114 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | iron-hydroxamate transporter substrate-binding subunit |
Protein accession | YP_003258591 |
Protein GI | 261820485 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGCCTG AATTTTTTTC TTCCCCACAT TATCCTGACC CGCTGCGCCG TCGTTTACTG ACGGCGCTAC TGCTGTCGCC GCTGGTTTAT TCGGCTGCGA GTAGAGGTGC TATTGCCACG CCTCCTGATG TAAACCGCAT TGTGGCATTG GAGTGGTTGC CTGTTGAACT GCTTCTGGCG TTGGGCCTCA CCCCCCTCGC GATTGCTGAT AAGCGTAATT ACAATCTGTG GGTGAAAGAG CCGGAACTGC CAGAGTCGGT GATCGATATC GGATTACGTA CCGAACCTAA TCTGGAGTTG CTGGCACAGA TTCGCCCGTC CATGATTATT TATTCAGAAG GTTACGGTCC CTCGGTAGCG AAAATGTCCC GTATTTCTCC GATGCTGGGC TTTAGCTTTA GCAGCGAACA GGGAAAGCCG CTGACGTCGG CACAGGCCTC GTTAATGAAA TTGGCCGATG CGCTAAATAT GAAAGCCGTT GGGGAACGGC ATTTGGCGGA GCTGGCGCAG TTTCTCCAGC AGGAAAAAAT CACGCTTCAA CCGTATACCC AGCGGCCTCT GCTGCTCATT ACGCTGATCG ATAGCCGCCA TGCGCTGGTG ATCGGCAAGA ATAGCCTGTT TCAGGAAGTG ATGGACCATA TCGGGATAGA GAATGCCTGG CATGGTGAAA CCAGCTTCTG GGGCAGCACG ATTGTGGGCA TTGAAAGTCT GGCAAACATT GGTGATGCCA ACGTGCTCTG TTTCGAGCAC GGCGATAGCG CGATCAGCGC ACAGCTTGAT AGTAATCCGC TCTGGCAGGC TATGCCATTT GTGCGTCAAC AGCGTTTACA ACGCGTACCA GCCGTCTGGT TGTATGGTGG AACGCTCTCG GCAATGCGCT TCTGCCGCGT ATTGAATCAG GCATTGGAGG CGAAAAAACA TGCCTAA
|
Protein sequence | MMPEFFSSPH YPDPLRRRLL TALLLSPLVY SAASRGAIAT PPDVNRIVAL EWLPVELLLA LGLTPLAIAD KRNYNLWVKE PELPESVIDI GLRTEPNLEL LAQIRPSMII YSEGYGPSVA KMSRISPMLG FSFSSEQGKP LTSAQASLMK LADALNMKAV GERHLAELAQ FLQQEKITLQ PYTQRPLLLI TLIDSRHALV IGKNSLFQEV MDHIGIENAW HGETSFWGST IVGIESLANI GDANVLCFEH GDSAISAQLD SNPLWQAMPF VRQQRLQRVP AVWLYGGTLS AMRFCRVLNQ ALEAKKHA
|
| |