| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1167 |
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| Symbol | |
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| ID | 8529550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1257811 |
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| End bp | 1260255 |
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| Gene Length | 2445 bp |
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| Protein Length | 814 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | ATP-dependent RNA helicase HrpB |
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| Protein accession | YP_003258588 |
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| Protein GI | 261820482 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATTTTAC CGCCCGTCAG CGCCGTGCTG GATGATGTGA TAACGGCGCT ACATACTGCG
CCTCAGGTGC TGCTCAATGC CCCAACGGGG GCGGGGAAAT CAACTTGGCT GCCGTTGCAA
TTACTGCAAC AGGGCAATTT GAATGGGCGC ATCATCATGC TGGAGCCGCG CCGACTGGCG
GCGAAGAGTG TTGCCTGGCG GTTGGCACAG CAGCTAGGTG AAGAACCGGG GCAAACGATA
GGCTATCGGA TGCGCTCGGA ATCCTGCGTG AGCAATGCAA CGACGCTGGA AGTTGTCACT
GAAGGTATGC TAACCCGCTT GCTGCAACAG GATGCGGAAT TGCAAGGCGT AGCGCTGATT
ATCCTTGACG AATTCCATGA GCGTAGCGTG CAGGCCGATT TGGCATTGGC GTTGCTGCTT
GATGTGCAAC AAGGGCTGCG TGACGATTTA AAACTGCTGA TTATGTCGGC CACACTCGAC
AATGCACGGC TGGCGATGCT GCTGCCGGAG GCTGTCTGCG TGGTCTCCGA AGGTCGCAGC
TATCCGGTAG AACGGTGTTA TGCACCGCTA AATAGTCAGG AACGTTTAGA AGAGGGCGTT
GCACGACAGG TCCGGCGTTT GCTCAGTGAG GAAGACGGCT CTCTGTTGCT GTTTCTGCCC
GGCGTCGCAG AAATTCGCCG CGTGCAGGCG CTGCTGGAGA ATAGCGTGTC GAGTGAGACG
GATCTCTGTC CTTTATATGG CGCATTGACG CTGGCGGAAC AGCAAAAGGC CATTCTTCCA
GCGGAGCCGG GTCGTCGTAA GGTGGTGTTA GCCACTAATA TTGCGGAAAC CAGTTTGACA
ATTGAAGGTA TCCGGCTGGT GGTGGACAGC GGCCTTGAAC GCGTAGCCAG CTTTGATGTG
AAAAGCGGCG TCACCCGGCT GGTGACACAG CGCATCAGTC AGGCATCTAT GGTCCAGCGC
GCGGGGCGTG CGGGACGTTT AAGCCCCGGT ATTTGCTGGC ATCTGTGCTC TCGTGAACAG
GCAGAACGTG CGGCAGTACA AAGCGAAGCC GAGATCCTGA GTAGTGATTT AAGCAGCGTC
TGGCTGGATT TACTACAGTG GGGCTGTACC GATGTGGCGC AGTTAACCTG GCTGGATACG
CCGCCAGCAC CTGCGCTTTA TGCCGCTCGT CAACTGCTGT GCCAGCTTGG CATCACTGAT
GAACATGAGC GGTTGACCGC CGAGGGGCGC AAGATTGCGA CACTCGGCAG CGATGCTCGA
TTGGCAACGA TGCTGTATGC CGCGTCACAG CAAAGTTCGG GTGCGTTGGC GACCGCAGGG
TGTCTGGCGG CGATACTTGA AGAGCCGCCG CGTAGCGGAT CGATCAATCT GGCTGACTGG
CTGCATCGTC CATTACCGCA CTGGCTGCGG CGAGCAAAAC AGTTGACGCG CCGTTTATCG
ATGACCTCGG GGAATATTGA CGACGGCGAA GCTGACTGGC TGCTGGCTCA GGCTTTCCCT
GACCGTATCG CCCGGCGGCG CAGTCAGGAT GGGCGTTACC AACTCGCTAA CGGTAGCGGC
GCGATGATGT CGGCGGATGA CGCGTTGTCA GGTAACGAAT GGCTGCTGGC ACCGGCGCTA
TTGCAGAATA GTCAGAGTGC AGACGCGCGG ATCCTACTGG CGTTGCCGTT GGATATTGAA
CGGCTGGAAC GGCGGTTACC TGGATTAATA AATGAACGTA ACGTGGTGCA CTGGGATGAA
GAAAAGGGTA CTCTGCGCGC CAGCCAGCGC GACCAGATAG GCTGCCTGAT TCTGCGAACG
CGCCCGTTGA ATAAGCCTTC CGATGAGGCA TTACAGCAGG CGATGCTATT CTGGATTCGG
GAGCAGGGGC TTAAAGCATT AAATTGGGAT GCAGCAGCGT TGCAGCTACG CGCGCGCCTA
CAGTGCGCTT GTCAGTGGTT ACCTGAGGTT GACTGGCCGC AAGTGGATGA CGACACGCTA
CTGGCAACGC TGGAGATCTG GTTGCAGCCG TCACTGTCTG GCGTGCGCGA TTTACGTGCG
CTGCACCAGA TTAATTTGAG CGATGCCCTG TTGCGGCTGT TGGACTGGTC GCTGCGCCAG
CGGTTGGATA GCGCGCTACC CACGCACTAC ACCGCGCCCG GCGGGAGTCG TTTGCCCATT
GCCTATTATG ACGATAAGCC ACCAGTGCTG TCGGTACGGA TGCAGGAAAT GTTCGGCGAG
CAGCAGAGTC CGCTGCTGGC GGAAGGTCGT GTGGCGCTGG TGCTGGAACT TTTATCACCA
GCACAACGTC CATTACAGAT TACGCGGGAT TTAGCCGCAT TTTGGCAAGG CACTTACCGC
GAGGTGCAAA AAGAGATGAA GGGGCGTTAC CCCAAACATA TCTGGCCGGA CGATCCGGCG
AATACGGCGC CGACGAGGCG TACCAAGAAA TATCAGAATC ACTAA
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| Protein sequence | MILPPVSAVL DDVITALHTA PQVLLNAPTG AGKSTWLPLQ LLQQGNLNGR IIMLEPRRLA
AKSVAWRLAQ QLGEEPGQTI GYRMRSESCV SNATTLEVVT EGMLTRLLQQ DAELQGVALI
ILDEFHERSV QADLALALLL DVQQGLRDDL KLLIMSATLD NARLAMLLPE AVCVVSEGRS
YPVERCYAPL NSQERLEEGV ARQVRRLLSE EDGSLLLFLP GVAEIRRVQA LLENSVSSET
DLCPLYGALT LAEQQKAILP AEPGRRKVVL ATNIAETSLT IEGIRLVVDS GLERVASFDV
KSGVTRLVTQ RISQASMVQR AGRAGRLSPG ICWHLCSREQ AERAAVQSEA EILSSDLSSV
WLDLLQWGCT DVAQLTWLDT PPAPALYAAR QLLCQLGITD EHERLTAEGR KIATLGSDAR
LATMLYAASQ QSSGALATAG CLAAILEEPP RSGSINLADW LHRPLPHWLR RAKQLTRRLS
MTSGNIDDGE ADWLLAQAFP DRIARRRSQD GRYQLANGSG AMMSADDALS GNEWLLAPAL
LQNSQSADAR ILLALPLDIE RLERRLPGLI NERNVVHWDE EKGTLRASQR DQIGCLILRT
RPLNKPSDEA LQQAMLFWIR EQGLKALNWD AAALQLRARL QCACQWLPEV DWPQVDDDTL
LATLEIWLQP SLSGVRDLRA LHQINLSDAL LRLLDWSLRQ RLDSALPTHY TAPGGSRLPI
AYYDDKPPVL SVRMQEMFGE QQSPLLAEGR VALVLELLSP AQRPLQITRD LAAFWQGTYR
EVQKEMKGRY PKHIWPDDPA NTAPTRRTKK YQNH
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