Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1164 |
Symbol | dksA |
ID | 8529547 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1255464 |
End bp | 1255919 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | RNA polymerase-binding transcription factor |
Protein accession | YP_003258585 |
Protein GI | 261820479 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00894629 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGAAG GGCAAAATCG TAAGACATCT TCTCTGAGCA TTCTCGCAAT TGCCGGAGTA GAGCCGTACC AAGAGAAGCC GGGCGAAGAG TATATGAACG ACGCTCAGTT GGCTCATTTC AAGCGTATTC TTGAAGCATG GCGCAACCAA CTCATGGATG AGGTGGATCG GACCGTATCG CACATGCGCG ATGAAGCCGC CAATTTTCCC GATCCCGTGG ATCGCGCGGC GCAGGAAGAA GAGTTCAGTC TCGAACTGCG TAACCGTGAC CGTGAGCGTA AGCTGATCAA GAAAATCGCC AAAACCCTGG TGAAAATCGA AGATGAGGAT TTCGGATTCT GTGAATCCTG TGGCGTCGAG ATTGGCATCC GCCGTCTGGA AGCTCGTCCG ACTGCCGATC TGTGTATCGA CTGCAAAACG CTGGCAGAAA TACGCGAAAA GCAAATGGCA GGATAA
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Protein sequence | MQEGQNRKTS SLSILAIAGV EPYQEKPGEE YMNDAQLAHF KRILEAWRNQ LMDEVDRTVS HMRDEAANFP DPVDRAAQEE EFSLELRNRD RERKLIKKIA KTLVKIEDED FGFCESCGVE IGIRRLEARP TADLCIDCKT LAEIREKQMA G
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