Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1160 |
Symbol | panB |
ID | 8529543 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1251440 |
End bp | 1252234 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_003258581 |
Protein GI | 261820475 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.015216 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGA CGACTATCTC CCACTTGCGC CAATGGAAAC AAGAGCAGCG AAAATTCGCT ACGATAACGG CTTACGACGC CAGCTTTTCT CGTTTATTTT TTGAACAAGG CATTCGTGTG ATGCTGGTGG GTGACTCTCT GGGGATGACC GTGCAGGGGC ACGATTCCAC TTTGCCCGTG ACCACACGCG ATATCGTCTA CCATACGCAG TGCGTTCGAC GCGGTGCACC ACTCGCGCTG GTTCTCTCCG ATATGCCGTT TATGACCTAT GCCACGCCAG AACAAACATT TAGCCAGGCG GCAGAACTGA TGCGTGCCGG TGCGAATATG GTCAAGCTGG AAGGTGGAAG CTGGCTTGCC CCAACGGTAA AAATGCTGAC TGAACGTGCG GTGCCAGTTT GCGGTCATCT GGGCCTGACG CCGCAGTCCG TTAATATCTT CGGTGGTTAT AAAATTCAAG GTCGCAGCGA AACCGATGCC AACCAGTTGC TGGCTGATGC CCTCGCGCTA GAAGGCGCTG GCGCGCAACT ACTTGTGCTG GAATGCGTGC CTGTCGCGCT GGCTCAACGC GTAACAGACG CGCTGTCAAT TCCGGTAATC GGCATTGGCG CAGGCAACGT TACCGACGGG CAGATTCTCG TCATGCATGA TGCCTTCGGC ATAACCGGCG ACAACACGCC TAAGTTCGCC AAGAACTTTC TGGCGCAAAG CGGTGATATT CGCGCAGCGG CACGCCTGTA TGCACAGGAA GTCGAACAGG GTCTCTACCC AGCCGAAGAA CATTCATTTC ATTAA
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Protein sequence | MKPTTISHLR QWKQEQRKFA TITAYDASFS RLFFEQGIRV MLVGDSLGMT VQGHDSTLPV TTRDIVYHTQ CVRRGAPLAL VLSDMPFMTY ATPEQTFSQA AELMRAGANM VKLEGGSWLA PTVKMLTERA VPVCGHLGLT PQSVNIFGGY KIQGRSETDA NQLLADALAL EGAGAQLLVL ECVPVALAQR VTDALSIPVI GIGAGNVTDG QILVMHDAFG ITGDNTPKFA KNFLAQSGDI RAAARLYAQE VEQGLYPAEE HSFH
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