Gene Pecwa_1157 details

Gene Information

• Locus tag: Pecwa_1157
• ID: 8529540
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1249174
• End bp: 1249944
• Gene Length: 771 bp
• Protein Length: 256 aa
• Translation table: 11
• GC content: 51%
• Product: ABC-2 type transporter
• Protein accession: YP_003258578
• Protein GI: 261820472

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0839963
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATGCGTT TGTATTGGGT GGCGCTACAG AGTATCTGGG TTAAAGAAGT GACCCGATTT 
GGCCGTATAT GGATTCAGAC GCTGGTGCCG CCAGTGATTA CCATGACGTT GTACTTTATT 
ATTTTCGGTA ACCTGATTGG CTCACGTATT GGCGAAATGC ACGGTTTTAC CTACATGCAG 
TTTATCGTAC CGGGTCTGAT CATGATGGCG GTGATTACCA ACGCCTATGC CAACGTCGCT 
TCTTCCTTTT TTAGCGCCAA GTTTCAACGC AATATTGAAG AGTTGCTGGT TGCGCCGGTG 
CCAACACACG TGATCATTGC GGGTTATATT GGCGGTGGGA TCGCGCGCGG TGTGTGCGTA 
GGGGTTCTGG TCACTGCGGT GTCGTTGTTC TTCGTTCCGC TGCATGTACA TGCCTGGTGG 
GTTATTGTTC TGACACTATT ACTGACAGCA ACGCTGTTCT CGCTGGCGGG ATTACTGAAT 
GCGGTGTTTG CGAAAACCTT TGATGATATC AGTCTGATTC CAACGTTTGT GTTGACGCCT 
CTGACCTATC TGGGCGGTGT GTTCTACTCA TTGACGCTGT TGCCGCCTGT CTGGCAGGCC 
ATTTCCAAAC TGAACCCTGT GGTGTACATG ATTAGCGGCT TTCGCTACGG CTTCCTCGGA 
ATTCAGGATG TGCCGCTGCT GTTCACCATG TCGGTACTGA TTGCCTTTAT CGTGGTGTTT 
TATCTGCTGG TCTGGTGGCT GATTGAACGC GGACGTGGGC TGCGGACGTA G 

 

Protein sequence

MMRLYWVALQ SIWVKEVTRF GRIWIQTLVP PVITMTLYFI IFGNLIGSRI GEMHGFTYMQ 
FIVPGLIMMA VITNAYANVA SSFFSAKFQR NIEELLVAPV PTHVIIAGYI GGGIARGVCV 
GVLVTAVSLF FVPLHVHAWW VIVLTLLLTA TLFSLAGLLN AVFAKTFDDI SLIPTFVLTP 
LTYLGGVFYS LTLLPPVWQA ISKLNPVVYM ISGFRYGFLG IQDVPLLFTM SVLIAFIVVF 
YLLVWWLIER GRGLRT