Gene Pecwa_1146 details

Gene Information

• Locus tag: Pecwa_1146
• ID: 8529529
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: -
• Start bp: 1239535
• End bp: 1241700
• Gene Length: 2166 bp
• Protein Length: 721 aa
• Translation table: 11
• GC content: 51%
• Product: ribonucleotide-diphosphate reductase subunit alpha
• Protein accession: YP_003258567
• Protein GI: 261820461

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.749784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGGCAACAA CAGACCACGT GAGTGCAAAG GCAACCAAGA CCGACGCAGA TGCCCACTCG 
CTCGATTACC ATGCGCTGAA CGCCATGCTG AACCTCTACG ACGCCGAGGG AAATATCCAG 
TTCGAGATGG ATAAACTCGC GGCACGCCGT TATTTCCTAC AGCATGTGAA CCAGAACACC 
GTGTTCTTCC ACAACCTGGA AGAAAAGCTG CGTTATTTGG TCGAAGAAGG TTACTACGAA 
GCGGACGTGT TGGATCAATA CAGCTTCGAT TTCATCAAGA GCCTTTTCCA GCAGGCCTAC 
GCTCACAAAT TCCGCTTTCA AACCTTTCTG GGCGCGTTCA AATACTACAC CGGCTATACG 
CTGAAAACCT TTGATGGAAA ACGCTATCTG GAGCGCTACG AAGATCGCGT CTGCCTCGTG 
GCGCTAGCGC TCGCCAAAGG GGACACTGCG CTGGCTAGCG CGCTGGTCGA CGAGATTATC 
AGCGGACGTT TCCAGCCCGC CACGCCCACG TTCCTCAACT GTGGTAAAAA ACAGCGCGGC 
GAACTGGTCT CCTGTTTTCT GCTGCGTATC GAAGACAATA TGGAGTCAAT TGGTCGAGCG 
ATTAACTCCG CGCTTCAGCT TTCAAAACGC GGCGGTGGCG TGGCCTTCAT GCTCAGCAAC 
ATCCGTGAAA CCGGTGCGCC AATCAAGCGT ATCGAGAATC AGTCATCTGG CATTATTCCT 
ATCATGAAAA TGTTGGAGGA TGCTTTCTCC TATGCCAACC AGCTAGGCGC ACGTCAGGGC 
GCTGGCGCGG TGTACCTCAA TGCACACCAC CCAGATATTC TGCGTTTTCT GGATACTAAG 
CGGGAAAATG CCGATGAAAA AATCCGCATC AAAACGCTGT CTTTGGGCGT GGTCATTCCC 
GATATTACGT TCCAGTTAGC GAAGAATAAT CAGGTGATGT ACCTGTTCTC GCCCTATGAT 
GTCGAACAGG TTTATGGCAT GCCGCTTTCG GAAATTAGCG TGACCGAAAA ATACCACGAG 
ATGGTCAACG ACAAGCGCAT TCGTAAATCC CAAATCAAGG CGCGCGAATT CTTCCAGATC 
CTCGCCGAGA TCCAATTCGA ATCGGGTTAT CCCTATATGA TGTTTGAGGA TACGGTGAAT 
CGCGCGAATC CGATTCACGG TCGTATTAAT ATGAGTAACC TGTGCTCTGA GATTTTGCAG 
GTCAATGACG CCAGCCTGTA CGACGACGAT CTCGGCTATC GTCATATTGG CAAAGACATC 
TCCTGTAATC TCGGTTCAAT GAATATCGCC AACGCGATGG CCTCACCCGA TTTCGGCCAG 
ACGGTTGAAA TGGCGATCCG GGCATTGACC GCCGTTTCCG ATATGAGCCA CATCAGTTCT 
GTACCATCTA TCGAAAAAGG CAACGACGAA TCGCACGCCA TTGGTTTAGG CCAGATGAAT 
CTGCATGGCT ACCTGGCGAA GGAGCGTATC TTTTACGGCA CAGAAGAAGC TGTCGATTTC 
ACCAATATCT ATTTCTACAC CGTTGCTTTC CACGCGATTC GGGCATCGAA TGCGCTAGCG 
ATAGAGCGTA ACCAGCGCTT CTCCGGTTTT GAACTCTCAA AATACGCCAC TGGCGAGTAT 
TTTGATAAAT ACATCGAACA GCAGTGGGAA CCGACAACAA CTCGCGCACG TGAACTGTTT 
GAACAGGCAG GCATCCACAT TCCTACTCAG CAGGACTGGG CGGCGCTACG CGAATCCGTC 
ATTGCACACG GTATTTATAA CCAGAACTTG CAGGCCGTTC CGCCGACTGG TTCGATTTCA 
TATATCAATC ACTCGACATC CAGCATCCAC CCGATTGTGT CACGCATCGA AATTCGTAAA 
GAGGGCAAGA TTGGCCGCGT CTACTACCCT GCTCCTTACA TGAATAACGA CAACCTGGAG 
TATTACCAGG ATGCCTATGA GATCGGGCCA CAGAAGATCA TCGATACCTA CGCCGCTGCC 
ACGCAACACG TCGATCAGGG GCTGTCGCTG ACGCTGTTTT TCCGCGATAC CGCCACCACG 
CGTGACATCA ATAAAGCGCA GATCTACGCC TGGACCAAGG GCATTAAAAC TATTTATTAC 
ATTCGCATAC GGCAGATGGC GCTGGAAGGC ACCGAAGTTC AGGGCTGTGT GTCCTGTGCG 
CTATAA 

 

Protein sequence

MATTDHVSAK ATKTDADAHS LDYHALNAML NLYDAEGNIQ FEMDKLAARR YFLQHVNQNT 
VFFHNLEEKL RYLVEEGYYE ADVLDQYSFD FIKSLFQQAY AHKFRFQTFL GAFKYYTGYT 
LKTFDGKRYL ERYEDRVCLV ALALAKGDTA LASALVDEII SGRFQPATPT FLNCGKKQRG 
ELVSCFLLRI EDNMESIGRA INSALQLSKR GGGVAFMLSN IRETGAPIKR IENQSSGIIP 
IMKMLEDAFS YANQLGARQG AGAVYLNAHH PDILRFLDTK RENADEKIRI KTLSLGVVIP 
DITFQLAKNN QVMYLFSPYD VEQVYGMPLS EISVTEKYHE MVNDKRIRKS QIKAREFFQI 
LAEIQFESGY PYMMFEDTVN RANPIHGRIN MSNLCSEILQ VNDASLYDDD LGYRHIGKDI 
SCNLGSMNIA NAMASPDFGQ TVEMAIRALT AVSDMSHISS VPSIEKGNDE SHAIGLGQMN 
LHGYLAKERI FYGTEEAVDF TNIYFYTVAF HAIRASNALA IERNQRFSGF ELSKYATGEY 
FDKYIEQQWE PTTTRARELF EQAGIHIPTQ QDWAALRESV IAHGIYNQNL QAVPPTGSIS 
YINHSTSSIH PIVSRIEIRK EGKIGRVYYP APYMNNDNLE YYQDAYEIGP QKIIDTYAAA 
TQHVDQGLSL TLFFRDTATT RDINKAQIYA WTKGIKTIYY IRIRQMALEG TEVQGCVSCA 
L