Gene Pecwa_1139 details

Gene Information

• Locus tag: Pecwa_1139
• ID: 8529521
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1233107
• End bp: 1233892
• Gene Length: 786 bp
• Protein Length: 261 aa
• Translation table: 11
• GC content: 48%
• Product: hypothetical protein
• Protein accession: YP_003258560
• Protein GI: 261820454

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGCGGAAAA AAACCTATGC AATGAGGTAT GTTGCTGGCC AACCAGTTGA ACGTATCTTC 
CCTCCCGGGG AAATGCATTA TCCGGGGCAA GCGCTACCGA CAGGCCCATT GTTGCTGGAG 
GGCGATGTTT TACGCGTAAT GGTGTGGAAC ATTTTTAAGC AACAAAGAAT GAACTGGCTT 
TCTGTATTAC AGAATTTCGG TAAAGATACC CAGTTAGTTC TATTACAGGA AGCACAAAGT 
ACGCCGGACC TTATCCGTTT TGCAACCACT CACTACCTTT CTGCCGATCA GGTTCCTGCC 
ATTATCCTCC CACACCCGTC CGGTGTGATG ACGCTATCAG CAGCCCAGCC AGTATATTGT 
TGTCCTTTAC GTGAACGGGA GCCTTTACTG CGTTTGGCTA AGTCCTCTTT GGTGACGGTT 
TATGCGCTTC AGAATGGGCA GAGGCTGATG GTTATCAATA TCCATGCGGT TAATTTTAGT 
TTTGGTGTAG AAGTCTATAC CAAACAACTG GCAGCAATTG GGGAGCAACT CGTACATCAT 
CAAGGGCCGG CTATTATGGC CGGAGATTTC AATGCATGGA GCCAGCAACG TATCAGTGCG 
CTTAATCGGT TTGCGGCGGG GATGCGGTTG CAGGAAGTCT GTTTTGTTGA TGACCAGCGA 
CGTAAGGCGT TTGGCCGGCC GTTGGATTTT GTTTTTTACC GTGAGCTGAT CGTCAACCAG 
TCGTCTGTAT TGGTGACTAC GGCCTCAGAT CATAATCCAC TACTCGTTGA GTTTAGCCTG 
ATTTAA 

 

Protein sequence

MRKKTYAMRY VAGQPVERIF PPGEMHYPGQ ALPTGPLLLE GDVLRVMVWN IFKQQRMNWL 
SVLQNFGKDT QLVLLQEAQS TPDLIRFATT HYLSADQVPA IILPHPSGVM TLSAAQPVYC 
CPLREREPLL RLAKSSLVTV YALQNGQRLM VINIHAVNFS FGVEVYTKQL AAIGEQLVHH 
QGPAIMAGDF NAWSQQRISA LNRFAAGMRL QEVCFVDDQR RKAFGRPLDF VFYRELIVNQ 
SSVLVTTASD HNPLLVEFSL I