| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1136 |
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| Symbol | rluD |
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| ID | 8529512 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1222605 |
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| End bp | 1223582 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | |
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| Product | 23S rRNA pseudouridine synthase D |
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| Protein accession | YP_003258557 |
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| Protein GI | 261820451 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.339776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACAAC AAGTACAACT CACCGCAACG GTGGCCGAAT CTCAACTCGG ACAACGTTTA
GATCAGGCTT TGGCCGAATT GTTCCCTGAT TATTCTCGAT CCCGTATAAA AGAGTGGATT
CTTGAGAATC GGGTACAGAT TAACGGCAAT GTCATCAATA AGCCAAAAGA GAAAGTACTT
GGCGGCGAAT CGGTAGCCAT TGATGCATTG ATTGAAGAAG AAGCACGCTG GGAAGCACAG
GATATCAAGT TGGATATCGT GTACGAAGAT CAGGATATTC TGGTTATTAA CAAATCCAGA
GATCTGGTGG TTCACCCTGG TGCGGGTAAT CCAGATGGCA CGGTATTGAA TGCTTTGTTA
CATCATTATC CTGAGATTGT CGATGTGCCC CGCGCTGGGA TTGTGCATCG GCTTGATAAA
GATACGACAG GACTCATGGT TGTCGCGAAA ACCGTGCCGG CACAGACTCG TCTCGTTGAG
GCGTTGCAGG CACGCGAAAT CACTCGTGAG TATGAGGCTG TCGCGATTGG TTCTATGACG
GCAGGCGGTA TGGTCGAGCA ACCTATCGCC CGTCACGCAA CTAAGCGTAC TCACATGGCT
GTACACCCGA TGGGCAAGCC GGCAGTCACG CATTACCGCA TCATGGAACA TTTCCGTGCG
CATACCCGCT TGCGATTGCG GTTGGAAACG GGACGCACCC ACCAGATTCG TGTGCATATG
TCACACATTA ACCATCCACT GGTTGGCGAT CAGTTATACG GCGGTCGCCC TCGTCCGCCA
AAAGGCGCGT CGGATGATTT CATTGAGACG CTGCGTGGGT TCGATCGTCA GGCTCTGCAC
GCTACCATGC TACGCTTCTA CCATCCTATT ACCGGAATCC AAATGGAATG GCATGCGGCA
TTACCGCAGG ATATGGTCGA TCTGATTGAG GCGCTGAAAG CCGATACTGA AGCGTTTAAG
GATCAACTCG ACTGGTAA
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| Protein sequence | MAQQVQLTAT VAESQLGQRL DQALAELFPD YSRSRIKEWI LENRVQINGN VINKPKEKVL
GGESVAIDAL IEEEARWEAQ DIKLDIVYED QDILVINKSR DLVVHPGAGN PDGTVLNALL
HHYPEIVDVP RAGIVHRLDK DTTGLMVVAK TVPAQTRLVE ALQAREITRE YEAVAIGSMT
AGGMVEQPIA RHATKRTHMA VHPMGKPAVT HYRIMEHFRA HTRLRLRLET GRTHQIRVHM
SHINHPLVGD QLYGGRPRPP KGASDDFIET LRGFDRQALH ATMLRFYHPI TGIQMEWHAA
LPQDMVDLIE ALKADTEAFK DQLDW
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