Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_1135 |
Symbol | |
ID | 8529511 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 1221736 |
End bp | 1222470 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | outer membrane protein assembly complex subunit YfiO |
Protein accession | YP_003258556 |
Protein GI | 261820450 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.603572 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCGTA TGAAATATCT GGTGGCTGCC GCCACGTTGA GCCTGGCGCT GGCTGGTTGC TCCGGCAATT CCAAAGATGC GGTTCCTGAT AGTCCGCCAT CTGAAATCTA TGCCAATGCT CAACAAAAAC TGCAGGACGG CAACTTTAAA GCAGCCATCA CGCAGTTGGA AGCACTGGAT AACCGATATC CCTTTGGCCC CTATTCACAG CAAGTACAGT TGGATTTGAT CTACGCCTAC TACAAATCCG CAGAACTGCC ATTGGCCCAA GCTTCTATTG ACCGCTTCCT ACGGCTCAAC CCGACCCATC CAAACGTGGA TTATGTCCTT TACATGCGCG GTCTGACCGA CATGGCGCTG GATGATAGTG CGTTACAAGG CTTCTTCGGG GTCGATCGTT CCGATCGCGA CCCGCAGTAT GCCCGTACCG CATTCCGGGA TTTCAGCAAG CTCATTCAGG GATACCCGAA CAGCCAATAC GCCACCGACG CAAACAAGCG TTTGGTTTAC CTCAAAGAGC GTCTGGCCAA GTATGAACTT TCTGTCGCGC AATACTACAC GAAACGCGGC GCTTATGTGG CAGTAGTTAA TCGCGTTGAG CAAATGCTGC GTGATTACCC TGATACCCAG GCGACAAAAA ATGCCCTGCC GTTGATGGAA AGCGCCTACC GTGAACTGCA ACTGGCCGCA CAGGCAGACA AAGTCGCAAA AGTGATTGCC GCTAACCCGG CATAA
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Protein sequence | MTRMKYLVAA ATLSLALAGC SGNSKDAVPD SPPSEIYANA QQKLQDGNFK AAITQLEALD NRYPFGPYSQ QVQLDLIYAY YKSAELPLAQ ASIDRFLRLN PTHPNVDYVL YMRGLTDMAL DDSALQGFFG VDRSDRDPQY ARTAFRDFSK LIQGYPNSQY ATDANKRLVY LKERLAKYEL SVAQYYTKRG AYVAVVNRVE QMLRDYPDTQ ATKNALPLME SAYRELQLAA QADKVAKVIA ANPA
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