Gene Pecwa_1135 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPecwa_1135 
Symbol 
ID8529511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium wasabiae WPP163 
KingdomBacteria 
Replicon accessionNC_013421 
Strand- 
Start bp1221736 
End bp1222470 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content53% 
IMG OID 
Productouter membrane protein assembly complex subunit YfiO 
Protein accessionYP_003258556 
Protein GI261820450 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.603572 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCGTA TGAAATATCT GGTGGCTGCC GCCACGTTGA GCCTGGCGCT GGCTGGTTGC 
TCCGGCAATT CCAAAGATGC GGTTCCTGAT AGTCCGCCAT CTGAAATCTA TGCCAATGCT 
CAACAAAAAC TGCAGGACGG CAACTTTAAA GCAGCCATCA CGCAGTTGGA AGCACTGGAT 
AACCGATATC CCTTTGGCCC CTATTCACAG CAAGTACAGT TGGATTTGAT CTACGCCTAC 
TACAAATCCG CAGAACTGCC ATTGGCCCAA GCTTCTATTG ACCGCTTCCT ACGGCTCAAC 
CCGACCCATC CAAACGTGGA TTATGTCCTT TACATGCGCG GTCTGACCGA CATGGCGCTG 
GATGATAGTG CGTTACAAGG CTTCTTCGGG GTCGATCGTT CCGATCGCGA CCCGCAGTAT 
GCCCGTACCG CATTCCGGGA TTTCAGCAAG CTCATTCAGG GATACCCGAA CAGCCAATAC 
GCCACCGACG CAAACAAGCG TTTGGTTTAC CTCAAAGAGC GTCTGGCCAA GTATGAACTT 
TCTGTCGCGC AATACTACAC GAAACGCGGC GCTTATGTGG CAGTAGTTAA TCGCGTTGAG 
CAAATGCTGC GTGATTACCC TGATACCCAG GCGACAAAAA ATGCCCTGCC GTTGATGGAA 
AGCGCCTACC GTGAACTGCA ACTGGCCGCA CAGGCAGACA AAGTCGCAAA AGTGATTGCC 
GCTAACCCGG CATAA
 
Protein sequence
MTRMKYLVAA ATLSLALAGC SGNSKDAVPD SPPSEIYANA QQKLQDGNFK AAITQLEALD 
NRYPFGPYSQ QVQLDLIYAY YKSAELPLAQ ASIDRFLRLN PTHPNVDYVL YMRGLTDMAL 
DDSALQGFFG VDRSDRDPQY ARTAFRDFSK LIQGYPNSQY ATDANKRLVY LKERLAKYEL 
SVAQYYTKRG AYVAVVNRVE QMLRDYPDTQ ATKNALPLME SAYRELQLAA QADKVAKVIA 
ANPA