Gene Pecwa_1126 details

Gene Information

• Locus tag: Pecwa_1126
• Symbol: trmD
• ID: 8529502
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium wasabiae WPP163
• Kingdom: Bacteria
• Replicon accession: NC_013421
• Strand: +
• Start bp: 1213207
• End bp: 1213962
• Gene Length: 756 bp
• Protein Length: 251 aa
• Translation table: 11
• GC content: 51%
• Product: tRNA (guanine-N(1)-)-methyltransferase
• Protein accession: YP_003258547
• Protein GI: 261820441

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.882983
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGGATTG GGGTGATTAG CCTGTTTCCA GAGATGTTCC GGGCAATTAC TGATTACGGA 
GTCACTGGCC GGGCAGTTAA AAATGGCCTG CTGAACGTAC AGTATTGGAG TCCTCGCGAC 
TTCACTTACG ATCGGCATCG CACCGTGGAT GACCGGCCTT ATGGCGGTGG TCCCGGAATG 
CTGATGATGG TGCAACCTTT ACGGGATGCG ATCCACGCAG CAAAAGCAGC GGCAGGTGAA 
GGCGTGAGAG TGATTTATCT ATCACCTCAG GGCCGTAAAT TAGATCAGCA AGGCGTGCGT 
CAACTTGCTA CAAACCAGAA GATGATTCTG GTTTGTGGAC GGTACGAAGG GATTGATGAG 
CGCGTAATTA AAACCGAGAT CGATGAAGAA TGGTCGATAG GGGATTACGT ACTCAGCGGT 
GGGGAACTGC CAGCGATGAC CCTGATTGAC TCCGTTGCCC GTTTTATACC GGGCGTTCTG 
GGGCATCAGG CTTCAGCAGA AGAAGATTCT TTTGCCGATG GATTGCTGGA CTGTCCTCAT 
TTCACTCGCC CTGAAATACT GGAAAGCATG GAGGTTCCGG CAGTATTACT GTCTGGTAAC 
CATGCGGAAA TACGTCGCTG GCGATTGAAG CAGTCGCTGG GCCGAACCTG GCTTAGAAGA 
CCTGAACTTC TGAAAAGCCT AGCTCTGACT GACGAGCAAA TAAGGTTGCT GGCTGAATTT 
CAACGTGAAC ATCAGTCTGA GCAACGAGAG TATTAG 

 

Protein sequence

MWIGVISLFP EMFRAITDYG VTGRAVKNGL LNVQYWSPRD FTYDRHRTVD DRPYGGGPGM 
LMMVQPLRDA IHAAKAAAGE GVRVIYLSPQ GRKLDQQGVR QLATNQKMIL VCGRYEGIDE 
RVIKTEIDEE WSIGDYVLSG GELPAMTLID SVARFIPGVL GHQASAEEDS FADGLLDCPH 
FTRPEILESM EVPAVLLSGN HAEIRRWRLK QSLGRTWLRR PELLKSLALT DEQIRLLAEF 
QREHQSEQRE Y