| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pecwa_1082 |
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| Symbol | |
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| ID | 8529456 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium wasabiae WPP163 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013421 |
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| Strand | + |
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| Start bp | 1171599 |
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| End bp | 1173026 |
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| Gene Length | 1428 bp |
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| Protein Length | 475 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | type VI secretion-associated protein, VC_A0119 family |
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| Protein accession | YP_003258503 |
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| Protein GI | 261820397 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.424761 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGCAC ATCCCTGGTG TAAACGCCTG CAAACTTCGT TGCCGGATGA GAAGTTGCGC
GCTGCGGTGT TGGCCGACGA TCCGCTTTGG GAAAAGGTAG AAACAGAGCT GGTCAAACTG
GGATCGCTGG CGCACAACCA GGTCGATCTT AATGCGGTGG CGGGTTATTG CCTGACGTTG
CTGGAAAGCA AGACCAAAGA CATGCGGGTA TTGGTGCAGC TATTGCGCTG CTTACAGCAC
CCGGCTAAAG CGACGCCGTT TTCTACCGCG CTGATGTTGT TGGACAGTTG GCTGGAGAGT
TACTGGGTTA CCGCCTGGCC TGCCAGTCCG GTTCAAAAAC AAAAGTTGAT GATCCAGATT
GTTCGGCGTT TTGAGGGCGC GCTCCCGCGC ATTGCAGAGA GCGCATCCAG TGCAGAGTTA
GAGCAATTAC AGCAGTTAAC TGAGCAAGTG GCGACCCGCT GGGGCGAACT GGTTAGCGAC
AAAGCCTCGC TGGTGGATGA GTTGGTGCAG GGCTTTAAAC GTGCCAGACA GCGGCAACAG
GCACAAGAGA AGGCGAACCA AACGGCAAAT TTGACCCCGG CAGCGAGCAG CAGCGGTGCC
ACTGGGGAGG GTGAAACTCG CGCTGGTACA GCCTCTACGC CGCCTGTCGG TTCCGTGGAA
ATTAATTCAT CCGACGAGCG CGGATGGCGG CAAACCCAGT TGAATGTTGC GACGCTGCTG
GTTGAGCGTC ATCCCGACTC ACCGATCGGC TACCGCCTGC GACGTCATGC TATCTGGTCC
GGCATTGCGA CTCCGCCGAT GTCGGCCAAG GGGAATAAAA CCCAATTGGC ACCCGTCTCG
GCAGATCGTG TGGATGAATA CCAAAGTGCG CTGGCACAGG CTGATTTGGC ACTGTGGGAA
CGTATAGAAC AAAGTCTGGT GCTGGCTCCT TATTGGTTTG ATGGCCATAT GTTGTCGGCC
TCGGTGGCAT CGCGGTTGGG GCATGCTCCT GTTGCGACAG CCATTGCTGA AGAGCTTTCT
GCATTTATTC AGCGTTTGCC GGAGTTGCGT GAACTGGCAT TCAGCGATGG TGCACCATTT
TTGACAGGGA AGTGTAGCCA GTGGTTGCAG TCCAGCCAGC CGGTGCGCGG TGGTGGCGGC
GCGCGGCAGG ACGATCTGGC GACGGAGGCG GCTGCCTGTC GGGATGAGAA AGGCATCGGG
GCGGCGATGT TGTTATTGGA TGAGCGCATG CGTCGCCTGA AAGAGCCTCG CGACCGTTTT
TATGCCGAGC TGGTACTGGC GGATTTACTC GCCGAAGAAG GAATGAAATC ACTGGCAGCA
CAGCACTATC AGCACATGTG GCAGGAAAGC CAGCAATTGG GCCTGATGCA ATGGGAACCG
GGAATGGTCA GCCGCGTGGA GCGGTTGGCG GCATCCCGCA AAAAATAA
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| Protein sequence | MHAHPWCKRL QTSLPDEKLR AAVLADDPLW EKVETELVKL GSLAHNQVDL NAVAGYCLTL
LESKTKDMRV LVQLLRCLQH PAKATPFSTA LMLLDSWLES YWVTAWPASP VQKQKLMIQI
VRRFEGALPR IAESASSAEL EQLQQLTEQV ATRWGELVSD KASLVDELVQ GFKRARQRQQ
AQEKANQTAN LTPAASSSGA TGEGETRAGT ASTPPVGSVE INSSDERGWR QTQLNVATLL
VERHPDSPIG YRLRRHAIWS GIATPPMSAK GNKTQLAPVS ADRVDEYQSA LAQADLALWE
RIEQSLVLAP YWFDGHMLSA SVASRLGHAP VATAIAEELS AFIQRLPELR ELAFSDGAPF
LTGKCSQWLQ SSQPVRGGGG ARQDDLATEA AACRDEKGIG AAMLLLDERM RRLKEPRDRF
YAELVLADLL AEEGMKSLAA QHYQHMWQES QQLGLMQWEP GMVSRVERLA ASRKK
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